Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 454 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  187 bits (474), Expect = 8e-52
 Identities = 123/427 (28%), Positives = 214/427 (50%), Gaps = 18/427 (4%)

Query: 12  RSHLLVGGLGFLTLTGVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVR 71
           RS + V     L +TG+   WA    +      +G  +  + ++ +Q+  GG+V+E+ VR
Sbjct: 40  RSRVTVWLAAVLIVTGLV--WAKLAVLQEVTTGEGKAIPSSKIQVIQNLEGGIVTEIFVR 97

Query: 72  DGDRVKAGDVVMRIDATMTRANLAIVVKSLDQFTARKARLEGERDRAASVVFPQSLRDRA 131
           +G  V  GD ++R+D T  ++N           TA+  RL  E +       P +L    
Sbjct: 98  EGQMVNKGDTLLRLDDTRYQSNKGESEADRYALTAQVERLSAEAEGR-----PFNL---- 148

Query: 132 GDAEVLA----MMNAEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQG 187
             AEV+A    +   E+ LYE R+    S++R L +++RQ   E++   +++        
Sbjct: 149 -SAEVIAKAPQVAEDERSLYEQRQRRLASEQRTLTEQLRQKTQELAEFRSKQGQFSSALA 207

Query: 188 MVDEELIRFRSLQERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQ 247
           ++ EE+     L   G +    +  L+R A +I G +      I   E+ I+E   +I +
Sbjct: 208 LLQEEMNMSAPLVRTGAVSPVEILRLKRSAVEIRGSLNATTLAIPRAESAINEIKSKIDE 267

Query: 248 IDEQWSEEVGSDLREMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIA 307
            ++ +  E   DL E    + +     +A +D++ R  +++P  GV+ QL V+T+GGV+ 
Sbjct: 268 SEQTFRSEAAKDLNEKRTELSKITASSIAIDDRVTRTTVVSPVHGVIKQLKVNTIGGVVQ 327

Query: 308 PGEQIMMIVPEVDKLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISAD 367
           PG  ++ IVP  D L++EAKV PQD+  ++ GQ   ++FSA++      ++  +E I AD
Sbjct: 328 PGNDMVEIVPLEDNLLIEAKVRPQDVAFLHPGQKAMVKFSAYDYTIYGGLSAKLELIGAD 387

Query: 368 VTVDQRTGASYYLVRVATSQEQIKRLGE-FSLMPGMPVEAFITTGERSVLSYFLKPLLDQ 426
              D + G S+YL++V T +  +    +   ++PGM     I TGE+SVL Y LKP+L  
Sbjct: 388 TITDDK-GNSFYLIQVRTDKNHLGGDAKPLLIIPGMVATVDIITGEKSVLDYLLKPVLKA 446

Query: 427 ANRTFRQ 433
                R+
Sbjct: 447 RTEAMRE 453