Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 456 a.a., secretion protein HlyD from Pseudomonas fluorescens FW300-N2C3

 Score =  193 bits (491), Expect = 8e-54
 Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 3/428 (0%)

Query: 9   RSIRSHLLVGGLGFLTLT-GVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSE 67
           R+   H    G+GFL LT G F  WA    +   V+  G++VV    K VQ  VGGVV +
Sbjct: 28  RTDAGHAARYGVGFLVLTLGGFLLWACLAPLDQGVVGSGTVVVAGERKAVQSLVGGVVEK 87

Query: 68  LMVRDGDRVKAGDVVMRIDATMTRANLAIVVKSLDQFTARKARLEGERDRAASVVFPQSL 127
           L+V DGDRV  G ++++++    ++ L + +  L    + +ARL  ER  +A + +P  L
Sbjct: 88  LLVSDGDRVTQGQLLVQLNTVQAQSQLDVTLGKLLNDRSVEARLIAERLGSAEIQWPAEL 147

Query: 128 RDRAGDAEVLAMMNAEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQG 187
              A +  V A M  + +L+  RRA   S+ + +E     L+ ++ G E  +     +  
Sbjct: 148 LAHADEPRVKAAMALQSQLFITRRAELGSRLQIIEHEAAALQQQLLGYEGVKRNYDAQMR 207

Query: 188 MVDEELIRFRSLQERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQ 247
              +EL   R L   G + +++L   ER A  + G I      +      I+E+ L+ LQ
Sbjct: 208 FQQQELEGLRDLAREGYVPRNKLFEAERNAAQLAGQIASGVGDVGRTRQAINESRLKALQ 267

Query: 248 IDEQWSEEVGSDLREMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIA 307
             +++  +  + L E+ A    Y ++  A + ++    I AP  G V  +++HTVGGV  
Sbjct: 268 AQQEFRRDAETQLSEVSAEAAGYADQIRALQFEVDNGAIRAPVAGQVMDVSIHTVGGVAQ 327

Query: 308 PGEQIMMIVPEVDKLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISAD 367
            G+ +M +VP    + + A+  P   +++  G   ++ F+A  +  TP +TGTV  +SAD
Sbjct: 328 AGQTLMQVVPLDAPMAITARFEPLMANKLRPGLPVHVHFTALQRVDTPTVTGTVTTVSAD 387

Query: 368 VTVDQRTGASYYLVRVATSQEQIKRLGEFSLM--PGMPVEAFITTGERSVLSYFLKPLLD 425
             ++++T   Y+  +V    + +  L    L   PGM  +  + TGER++++Y +KPL +
Sbjct: 388 QLINEQTHQPYFSAKVEIPADTVVALQSAGLQVRPGMLADVTVVTGERTLMNYLMKPLRE 447

Query: 426 QANRTFRQ 433
           +    F++
Sbjct: 448 RLLAAFKE 455