Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 437 a.a., hemolysin secretion protein D from Pseudomonas fluorescens FW300-N2C3

 Score =  250 bits (639), Expect = 5e-71
 Identities = 144/399 (36%), Positives = 219/399 (54%), Gaps = 8/399 (2%)

Query: 27  GVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRID 86
           G+FG WA    + GA  A G + V+   K VQH  GG+V  L+   GD VK  D ++ +D
Sbjct: 32  GLFGTWAAVAPLDGAAYAPGVVTVQAYRKTVQHLEGGIVKALLAHYGDIVKRDDPLIILD 91

Query: 87  ATMTRANLAIVVKSLDQFTARKARLEGERDRAASVVFPQSLRDRAGDAEVLAMMNAEQ-- 144
               R    +    L    A +ARL  ERD   ++ F  S      D + +  M A Q  
Sbjct: 92  DAQLRFEYEMARGQLIAARAMEARLVAERDSLPAISFGNS-----ADLDSVRGMEARQGE 146

Query: 145 -RLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRFRSLQERG 203
            R++  R+  R  +   L +R+ Q R +I GLE+   + V  +     E+     L ++G
Sbjct: 147 TRVFNARQGSRLGQIAVLRERIGQFRQQIKGLESMVGSKVHLEKSYSGEIEELTDLLKQG 206

Query: 204 LLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSEEVGSDLREM 263
            +DK RL   ER+   +  ++   R+ I     +I+ET LQILQ+D+ ++ +V   L E+
Sbjct: 207 FVDKQRLLEQERKLGLLHSEVADHRSTIDRTRLQINETQLQILQVDKDFNADVVKQLAEV 266

Query: 264 DARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVDKLV 323
             R+ +  E+  A ED+L R+ I AP  G+V  + VHT+GG++ P   ++ IVP V  L+
Sbjct: 267 QTRVYDLQEKTSALEDRLARIVIRAPDAGMVIDMTVHTIGGIVRPATPLLDIVPSVSDLI 326

Query: 324 VEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRTGASYYLVRV 383
           +EA+VAP DID+I  G+  ++RF AFN  TTP I G V  +SAD   +++TG +YYL RV
Sbjct: 327 IEAQVAPVDIDRIAIGKRADIRFGAFNSATTPVIEGEVSSVSADRMTNEKTGTAYYLARV 386

Query: 384 ATSQEQIKRLGEFSLMPGMPVEAFITTGERSVLSYFLKP 422
             + E  + LGE  L+PGMP +  I TG+R++L Y ++P
Sbjct: 387 RVTDEGARTLGERKLLPGMPADVLIITGQRTLLQYLMQP 425