Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 455 a.a., hemolysin secretion protein D from Pseudomonas fluorescens FW300-N2E3

 Score =  162 bits (409), Expect = 3e-44
 Identities = 113/406 (27%), Positives = 200/406 (49%), Gaps = 10/406 (2%)

Query: 20  LGFLTLTGVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAG 79
           +GF     ++  +AV  E+       G  +  + L+K+Q+  GG+V+EL VR+G  V+AG
Sbjct: 49  IGFFLFLLLWANFAVIDEVTKG---DGKAIPSSKLQKIQNLEGGIVAELFVREGQIVEAG 105

Query: 80  DVVMRIDATMTRANLAIVVKSLDQFTARKARLEGERDRAASVVFPQSLRDRAGDAEVLAM 139
             ++R+D T  ++N+            R  RL  E D       P S  D A  A V   
Sbjct: 106 APLIRLDDTRFKSNVGETEADRLSMLLRVERLSAEVDDR-----PLSFPDDAMKA-VPGQ 159

Query: 140 MNAEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRFRSL 199
             +E+ LYE RR     +   L++++ Q + E+    +++A       +  +E+     L
Sbjct: 160 AASEKSLYESRRQQLHDEVGGLQEQLIQKQQELREFTSKQAQYRSGLALQRQEINMSEPL 219

Query: 200 QERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSEEVGSD 259
             +G +    +  L+R   +  G +      I   E+ I E   +I +   ++  E  + 
Sbjct: 220 VAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSEALTQ 279

Query: 260 LREMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEV 319
           L E    + +      A ED++ R  + +P  G+V QL V+T+GGVI PG  ++ IVP  
Sbjct: 280 LNEARTDLNKAKATGKALEDRVSRTLVTSPVRGIVKQLLVNTIGGVIQPGSDMVEIVPLD 339

Query: 320 DKLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRTGASYY 379
           D L+VEAK+ PQDI  ++ GQ   ++F+A++      +   +E+I AD   D+    +YY
Sbjct: 340 DTLLVEAKIRPQDIAFLHPGQEAIVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYY 399

Query: 380 LVRVATSQEQIKRLGE-FSLMPGMPVEAFITTGERSVLSYFLKPLL 424
           ++++ T +  +    +   ++PGM     I TG++++LSY LKP++
Sbjct: 400 MIKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTILSYLLKPII 445