Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 450 a.a., type I secretion membrane fusion protein, HlyD family from Pseudomonas stutzeri RCH2

 Score =  184 bits (467), Expect = 5e-51
 Identities = 116/403 (28%), Positives = 201/403 (49%), Gaps = 8/403 (1%)

Query: 32  WAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRIDATMTR 91
           WA    +      +G  +  + ++ VQ+  GG+V+++ VR+G  V  GD ++R+D T   
Sbjct: 54  WANYAVLEEVTTGEGKAIPSSKIQTVQNLEGGIVAQIYVREGQVVNKGDTLLRLDNTRFL 113

Query: 92  ANLAIVVKSLDQFTARKARLEGERDRAASVVFPQSLRDRAGDAEVLAMMNAEQRLYEDRR 151
           +N            AR  RL  E +     +  +  RD    AE       E+ LYE R+
Sbjct: 114 SNQEETEAERLSLLARVERLAAEAEGRPLALPEEITRDAPQLAE------DERALYESRQ 167

Query: 152 AVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRFRSLQERGLLDKSRLS 211
               S++R L++++ Q + E++   +++        ++ +EL     L E G + +  + 
Sbjct: 168 QRLRSEQRILKEQLTQKQQEVAEFRSKQQQYRSSLSLIQQELNMSTPLVETGAISQVEIL 227

Query: 212 TLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSEEVGSDLREMDARIGEYV 271
            L R   D+ G +      +   EA  SE   +I Q +  +  E   DL      + +  
Sbjct: 228 RLRRSIVDVRGALDATTLALPRAEAAASEIQSRIEQSELAFRAEAFKDLNAARTLLQKIT 287

Query: 272 ERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVDKLVVEAKVAPQ 331
              VA +D++ R  +++P  G++ QL ++T+GGV+ PG  ++ IVP  D L++EAKV PQ
Sbjct: 288 ATSVAIDDRVSRTTVVSPVHGIIKQLRINTIGGVVQPGSDLLEIVPLEDSLLIEAKVRPQ 347

Query: 332 DIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRTGASYYLVRVATSQEQIK 391
           DI  ++ GQ   ++FSA++      +   +E ISAD T+  + G S+YL++V T +  + 
Sbjct: 348 DIAFLHPGQKAMVKFSAYDYTIYGGLKANLELISAD-TITDKDGRSFYLIQVRTEKNYLG 406

Query: 392 RLG-EFSLMPGMPVEAFITTGERSVLSYFLKPLLDQANRTFRQ 433
             G +  ++PGM     I TGE+SVL Y LKP+L   +   R+
Sbjct: 407 SPGHQLVIIPGMVATVDIITGEKSVLDYMLKPILKARHEALRE 449