Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  170 bits (431), Expect = 8e-47
 Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 27/422 (6%)

Query: 32  WAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRIDATMTR 91
           WA   EI    + QG +V  + ++ +Q+  GG+V +++VR+G++V+ G  ++ +D T  R
Sbjct: 67  WASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQKGQQLILLDDTRFR 126

Query: 92  ANLAIVVKSLDQFTARKARLEG------------ERDRAASV-------VFPQSLRDRAG 132
           ++     + +   TA   +L              E++ A SV        FP  L D   
Sbjct: 127 SDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDYSKLAFPPVLSDSQP 186

Query: 133 DAEVLAMMNAEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQ-GMVDE 191
           D     ++  ++  Y        ++   L Q+++Q + ++   EA R  N+R+      +
Sbjct: 187 D-----LVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEA-RIINLRQSYDYAKK 240

Query: 192 ELIRFRSLQERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQ 251
           EL     L   G++ K  L  L+RQ  D   ++      I  +++ + E  L  +   ++
Sbjct: 241 ELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVREAMLSRINAAQK 300

Query: 252 WSEEVGSDLREMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQ 311
           +  E    L +   ++    E  V  ED++ R  +++P  G V  L V+TVGGVI PG  
Sbjct: 301 FRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVGGVIQPGMN 360

Query: 312 IMMIVPEVDKLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVD 371
           I+ IVP  D L+VEA++APQDI  +       ++FSA++      + GT+E ISAD T D
Sbjct: 361 IIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEHISADTTQD 420

Query: 372 QRTGASYYLVRVATSQEQIKRLGEFSLMPGMPVEAFITTGERSVLSYFLKPLLDQANRTF 431
           +  G S+YLVRV T +  +       ++PGM     I TG+R+VL Y LKP+L   +   
Sbjct: 421 EE-GNSFYLVRVRTKETTLGHDQNLPIIPGMTASVDIITGKRTVLDYLLKPILSAQSNAL 479

Query: 432 RQ 433
           R+
Sbjct: 480 RE 481