Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 95/421 (22%), Positives = 171/421 (40%), Gaps = 44/421 (10%)

Query: 32  WAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRIDATMTR 91
           WA   ++     A G LVV    + +Q      +  + VRDG RV+ G  ++ +D     
Sbjct: 71  WAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVN 130

Query: 92  ANLAIVVKSL---------------DQFTARKARLEGERDRAASVVFPQSLRDRAGDAEV 136
            ++  +V                  DQ                +++    L ++      
Sbjct: 131 QDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDST 190

Query: 137 LAMMNAEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRF 196
           LA + AE ++    +A R+S    L Q    +   ++    ++   V+  G V+      
Sbjct: 191 LASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAA--RKKLNQVKVIGHVEY----- 243

Query: 197 RSLQERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSE-- 254
              QE+ LL+  R    +R   ++      L++    +E +++    Q      +W E  
Sbjct: 244 -LEQEKELLEAQRQVAQQRAELEV------LKSQYESLEERLTGFKAQK---QREWLEKR 293

Query: 255 -EVGSDLREMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIM 313
            +    L  ++  + +  ER     +QL+   I +P DG V QL+V+T+G V+ P + +M
Sbjct: 294 RQARLQLASLNQELSKVRER-----EQLEI--IRSPVDGTVQQLSVYTLGAVLQPAQNLM 346

Query: 314 MIVPEVDKLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQR 373
           +IVPE      E ++  +D+  +Y GQ   ++  AF       I   +  IS D T D++
Sbjct: 347 IIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQ 406

Query: 374 TGASYYLVRVATSQEQIKRLGE-FSLMPGMPVEAFITTGERSVLSYFLKPLLDQANRTFR 432
            G   +  ++      I   G+   L PGM V A I T +R V+ Y L P+ +      R
Sbjct: 407 LGL-VFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAEALR 465

Query: 433 Q 433
           +
Sbjct: 466 E 466