Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 492 a.a., Type I secretion membrane fusion protein, HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  311 bits (798), Expect = 2e-89
 Identities = 164/415 (39%), Positives = 253/415 (60%), Gaps = 1/415 (0%)

Query: 12  RSHLLVGGLGFLTLTGVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVR 71
           R  +  G L  L   G  G WA    +  AV A G++VVE++ K VQH  GG++ E++V+
Sbjct: 69  RQTIRAGWLIILVAFGGLGLWAATAPLSSAVGAPGTIVVESNRKTVQHLEGGIIKEILVK 128

Query: 72  DGDRVKAGDVVMRIDATMTRANLAIVVKSLDQFTARKARLEGERDRAASVVFPQSLRDRA 131
           +GDRV  GD ++R++ T   A+ A+V    + + A +ARL  ERD   ++ FP  L   A
Sbjct: 129 EGDRVHQGDPLIRLETTQALASAAVVSNQFETYQALEARLVAERDEQKTITFPPDLIAVA 188

Query: 132 G-DAEVLAMMNAEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVD 190
               E   ++ A+Q+ +++R    E +   L++R+ Q R EI GL+ +R +  R+  +  
Sbjct: 189 KLKPETAEILQAQQQQFDERHKSIEGQVAILQKRIAQSRQEIEGLKVQRQSKKRQLEIFQ 248

Query: 191 EELIRFRSLQERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDE 250
           +E++  R L  +G   ++R+  +ER+ T ++G++G   + +A  E  + E  LQI+Q  +
Sbjct: 249 DEIVGLRELLAKGYTPRTRILAMEREMTRLEGEVGTDTSSMARAEQAVGEAELQIIQTRQ 308

Query: 251 QWSEEVGSDLREMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGE 310
           Q+ E+V   LRE+  ++ E  ER   A D L R  +LA Q GV+  LAVHT+GG+I PGE
Sbjct: 309 QFREDVVGQLREVQTKLSELRERGTVATDVLSRTVLLASQAGVIQNLAVHTLGGIIKPGE 368

Query: 311 QIMMIVPEVDKLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTV 370
            +M IVPE D+LV+EA+++P+DID +  G  T +RFSAFN +T P I G + ++SAD  V
Sbjct: 369 TLMEIVPEDDRLVIEAQISPRDIDNVVPGMDTEVRFSAFNSRTIPIIDGVLSQVSADRFV 428

Query: 371 DQRTGASYYLVRVATSQEQIKRLGEFSLMPGMPVEAFITTGERSVLSYFLKPLLD 425
           ++R  +SYY  R+  S E++ +LG  +L  GMPV+  I TGER+VL YFLKPL D
Sbjct: 429 NERDSSSYYKARIEVSDEELAKLGGLALRAGMPVDVMIKTGERTVLHYFLKPLED 483