Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 441 a.a., HlyD family type I secretion membrane fusion protein (RefSeq) from Shewanella loihica PV-4

 Score =  128 bits (321), Expect = 4e-34
 Identities = 101/412 (24%), Positives = 191/412 (46%), Gaps = 31/412 (7%)

Query: 32  WAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRIDATMTR 91
           W++ T I     A+G +V     + +Q   GG ++ + V +GD V+ GD++    AT ++
Sbjct: 46  WSIFTNIEEIAKAKGQVVPLGHRQVIQSQTGGTLASIAVAEGDLVQKGDLIANFVATDSQ 105

Query: 92  A-------NLAIVVKSLDQFTARKARLEGERDRAASVVFPQSLRDRAGDAEVLAMMNAEQ 144
           A         A +   ++++TA     E + + A  + FP  +   A     LA MN E+
Sbjct: 106 ALKEELQSKQANLELKIERYTAFLEEREPDFN-AYQLGFPALV---AQHINALARMNQEK 161

Query: 145 R----LYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRFRSLQ 200
           +    L E   A  E++   +EQ +  L+D+I  +E              + L    S++
Sbjct: 162 QAIIALSESDVAKSEAELASVEQEITPLKDQIRSVE--------------QTLKMMNSVK 207

Query: 201 ERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSEEVGSDL 260
           E+  + K R+   +++      ++  L    + ++  I     Q+ Q       EVG   
Sbjct: 208 EQQAVSKLRMLESQQKLDAYIRELKVLEGRRSVLQRNIDNQEKQLAQKQASLFNEVGEKR 267

Query: 261 REMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVD 320
            +  A +   V R  +++  +++  + +P DG++  +  ++ G VI PG  + +IVP   
Sbjct: 268 TDAQAELLGIVARLKSSDSLVQQNRVTSPVDGIIQSIPNNSAGSVIQPGGTVAVIVPTTP 327

Query: 321 KLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRTGASYYL 380
             ++EAK++P+DI  +  GQ   ++  AF+      I G V++IS     D++ G  +Y 
Sbjct: 328 TALLEAKLSPRDIGFVTVGQKARIKIDAFDYSRYGAIDGLVKKISPSTDADEK-GGVFYK 386

Query: 381 VRVATSQEQI-KRLGEFSLMPGMPVEAFITTGERSVLSYFLKPLLDQANRTF 431
           V++A  +     +  + +L+PGM  EA I TG+++V  Y  KP+       F
Sbjct: 387 VQIAIDKPYFGDQPDKLALIPGMTGEADIVTGDKTVFQYLWKPVFTNVTEAF 438