Pairwise Alignments

Query, 583 a.a., bacteriocin ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (533), Expect = 2e-58
 Identities = 140/537 (26%), Positives = 274/537 (51%), Gaps = 10/537 (1%)

Query: 29  LMSALVNILYLTGSLFMMEVYDRVLPSRSLPTLVALFAIAAVLYAFQGLFDAIRGRLLVR 88
           + S L+N+  +   +F   VYD+V+P+ +  TL  L +   V++ F  +F  +R   +  
Sbjct: 159 IASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDV 218

Query: 89  ISDRLDQVLSTKVYDAVIGLQL--RLPVSGRQAQPLRDLDTIRSFLSGSGPTALFDLPWL 146
              + D ++S+K++  V+G+++  R P  G  A+ L++ ++IR F + +  ++L DLP+ 
Sbjct: 219 AGKKSDILISSKLFSKVMGIRMEARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFA 278

Query: 147 PFYIAICFAFHFWLGVTALAGAAILTVFTLMTELVSRRPVEEAAQHASRRNRLIEATRRN 206
             ++ + +     L    + G  IL +++ + +   +R +EE ++ AS++   +  +   
Sbjct: 279 LLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAG 338

Query: 207 ADIIAVMGMASPLRDRWQTDNRAYVREQRSASDIASGFGVASKVLRMLLQSGILAVGAWL 266
            + + + G     + RW+            +  I       +  ++     G++ VG +L
Sbjct: 339 LETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYL 398

Query: 267 VINEQATPGIIIAGSILSARALAP-VDLAIANWKGFIAARQSRYRLEKTLALLPDAAMR- 324
           + N   T G +IA ++LS RA+ P V L++ + + +  A+ S   +E+ +++ PD     
Sbjct: 399 ISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTR-YNQAKSSMTIIEQVMSM-PDEQEEG 456

Query: 325 ---LDLPAPQALLSVERVNAIPPEATEPVLQDIAFTLAAGSGLGVIGASGSGKSSLARLL 381
              +  P  Q  + ++RV    P +    ++D++ T+  G  + +IG  GSGK++L RL+
Sbjct: 457 KRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLI 516

Query: 382 VGLWRPVKGAIRLDGATLDQWPPEALARHIGYMPQMIELLDGTIAENIASFDRQASPEKI 441
           +GL++P +G +R+D   + Q     + R+IG +PQ   L  G+I +NI      +   ++
Sbjct: 517 MGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREV 576

Query: 442 IAAARAARIHDLVVSLPDGYSTDVGETGRQLSAGQKQRIALARALYGDPFLVVLDEPNSN 501
           + AA  A +       P G    VGE G  LS GQ+Q +++ARA  G P ++++DEP S 
Sbjct: 577 MDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSA 636

Query: 502 LDSEGEDALTAAILGIRERGGVAIVIAHRPSALLAMDKVLMLADGRQQAFGAKEEVL 558
           +D+  E  +   +  ++      I+I H+ S L  +D+V+++  G   A G K EVL
Sbjct: 637 MDNRSEMHIKQQLSQLKP-SETLILITHKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692