Pairwise Alignments

Query, 583 a.a., bacteriocin ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  207 bits (526), Expect = 2e-57
 Identities = 157/539 (29%), Positives = 259/539 (48%), Gaps = 14/539 (2%)

Query: 29  LMSALVNILYLTGSLFMMEVYDRVLPSRSLPTLVALFAIAAVLYAFQGLFDAIRGRLLVR 88
           L S ++ IL L   LF   V D+VL  ++  TL  L     +    + +   +R      
Sbjct: 166 LFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAH 225

Query: 89  ISDRLDQVLSTKVYDAVIGLQLRLPVS---GRQAQPLRDLDTIRSFLSGSGPTALFDLPW 145
            ++R+D  L  K+   + GL L    S   G     +R+LDTIR FL+GS  T   +L +
Sbjct: 226 TANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMFTLTVELLF 285

Query: 146 LPFYIAICFAFHFWLGVTALAGAAILTV--FTLMTELVSRR---PVEEAAQHASRRNRLI 200
           +       F +   L    L G  I TV  + L+   ++ R    +E+   HA+     +
Sbjct: 286 M-----FVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFL 340

Query: 201 EATRRNADIIAVMGMASPLRDRWQTDNRAYVREQRSASDIASGFGVASKVLRMLLQSGIL 260
             T   ++ +  + +      RW       V        + +      ++L+ +    IL
Sbjct: 341 TETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAIL 400

Query: 261 AVGAWLVINEQATPGIIIAGSILSARALAPVDLAIANWKGFIAARQSRYRLEKTLALLPD 320
            +GA  V++ + T G +IA ++++     P+   +  W  FI  R +  +L   L L  +
Sbjct: 401 WLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVE 460

Query: 321 AAMRLDLPAPQALLSVERVNAIPPEATEPVLQDIAFTLAAGSGLGVIGASGSGKSSLARL 380
                D       +S + +         P + D++  + AG  LGV+G SGSGKS+LARL
Sbjct: 461 QHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARL 520

Query: 381 LVGLWRPVKGAIRLDGATLDQWPPEALARHIGYMPQMIELLDGTIAENIASFDRQASPEK 440
           L+ L+ P +G+I +DG  L+    + L + +G + Q   L   +++ENIA    +AS E+
Sbjct: 521 LLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEE 580

Query: 441 IIAAARAARIHDLVVSLPDGYSTDVGETGRQLSAGQKQRIALARALYGDPFLVVLDEPNS 500
           II AA+ +  HD ++ LP GY T + E G+ LS GQ+QR+A+AR L  DP +++LDE  S
Sbjct: 581 IIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATS 640

Query: 501 NLDSEGEDALTAAILGIRERGGVAIVIAHRPSALLAMDKVLMLADGRQQAFGAKEEVLA 559
            LD E +  + A +  I  RG   I IAHR S +   D++++L  G     G+ +++LA
Sbjct: 641 ALDDESQAVIQANMASI-ARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLA 698