Pairwise Alignments

Query, 583 a.a., bacteriocin ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (459), Expect = 9e-50
 Identities = 154/548 (28%), Positives = 251/548 (45%), Gaps = 28/548 (5%)

Query: 29  LMSALVNILYLTGSLFMMEVYDRVLPSRSLPTLVALFAIAAVLYAFQGLFDAIRGRLLVR 88
           L +  + I  L   +    V D+VL  RSL +L  L      L   +  +  +R  +   
Sbjct: 172 LYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRNTVFGH 231

Query: 89  ISDRLDQVLSTKVYDAVIGLQL---RLPVSGRQAQPLRDLDTIRSFLSGSGPTALFDLPW 145
           ++ +++  LS ++Y  ++GL L   +   +G+    +R++  IR FL+GS    L DL +
Sbjct: 232 LASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIF 291

Query: 146 LPFYIAICFAFHFWLGVTALAGAAILTVFTLMTELVSRRPVEEAAQHASRRNRLIEATRR 205
           +  ++A+ F +   L    +    I  V  L+   + R+ VE   +  +     +     
Sbjct: 292 VTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVT 351

Query: 206 NADIIAVMGMASPLRDRWQTDNRAYVREQRSASDIASGFGVASKVLRMLLQSGILAVGAW 265
             + I          ++WQ      +     A       G A  +++ L  + +L  G  
Sbjct: 352 GIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVS 411

Query: 266 LVINEQATPGIIIAGSILSARALAPVDLAIANWKGFIAARQSRYRLEKTLALLPDAAMRL 325
            V+  + TPG ++A ++L+     PV      W+ F          + TL  L      L
Sbjct: 412 AVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDF----------QHTLIALRRVGDIL 461

Query: 326 DLP---APQALLSVERVNA----------IPPEATEPVLQDIAFTLAAGSGLGVIGASGS 372
           D P   + Q L SV  ++              +A E VL +++  +  G  +GV G SGS
Sbjct: 462 DEPRENSKQGLASVPELDGGIEFSNIRFRYHQDAPE-VLANLSLKIKPGQFIGVTGPSGS 520

Query: 373 GKSSLARLLVGLWRPVKGAIRLDGATLDQWPPEALARHIGYMPQMIELLDGTIAENIASF 432
           GKS+L RLL  L+ P  G + +DG  L    P +L R++  + Q   L  G++A+NI   
Sbjct: 521 GKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLC 580

Query: 433 DRQASPEKIIAAARAARIHDLVVSLPDGYSTDVGETGRQLSAGQKQRIALARALYGDPFL 492
             QAS E+I  AA+ A     +  LP G++  VGE G  LS GQ+QRIALARAL  +P +
Sbjct: 581 KPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRI 640

Query: 493 VVLDEPNSNLDSEGEDALTAAILGIRERGGVAIVIAHRPSALLAMDKVLMLADGRQQAFG 552
           ++LDE  S LD   E ++ + +  I  RG   I IAHR + +   D + +L  G+    G
Sbjct: 641 LLLDEATSALDYNSEASIMSNMDEIC-RGRTVISIAHRLNTIRHADNIFVLDKGQVAESG 699

Query: 553 AKEEVLAK 560
             EE+LA+
Sbjct: 700 THEELLAQ 707