Pairwise Alignments

Query, 410 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 414 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (448), Expect = 7e-49
 Identities = 116/383 (30%), Positives = 193/383 (50%), Gaps = 13/383 (3%)

Query: 28  PVIFSYGFRPFFLGGALWAIVAMVLWIAALSGFIDIGGDYGAPNWHAHEMLFGFASAVLA 87
           P +   GFRPFFL G+++A++A++ W+              A  WH HEMLFGFA A++A
Sbjct: 34  PAVLRLGFRPFFLLGSIYAVIAILAWVWMFQAGQPQLLQVPALWWHVHEMLFGFAMAIVA 93

Query: 88  GFLLTAVPNWTGRLPVSGKPLVWLFALWCAGRLLLLVPDQVGVVTAAAVDGLFLPALLAI 147
           GFLLTAV NWTG        L  + ALW   R+L  +P  V +   ++++ LFL A+   
Sbjct: 94  GFLLTAVQNWTGITGTKSHRLAGIVALWLMVRILFWLP--VPLWLTSSIEALFLLAVAYE 151

Query: 148 CAREVIAGRKWKDLKVLGGLLALSVANIVFHVAAIGGD--HSQMATRLAVSAYTVLVIIV 205
               V+  + W++L  +   L    AN   +    G     S    +  +  + +L+ ++
Sbjct: 152 VGLRVVKAKGWRNLFFIPLFLLAIAANFASYATIKGMPPFPSSAVWQAMLWWFMLLLSVM 211

Query: 206 GGRIVPSFTRNWLNRFGRTDFPVPYNGFDTAAILTGIVALAVWTIEPESM--LAVSTALL 263
           GGR++P FT     RF  T    P    D  A    ++AL V +  P +M  L     L+
Sbjct: 212 GGRVIPFFT---ARRFQFTK-AEPILALDVIA-NGSLLALFVLSFFPLTMAQLGQPLMLV 266

Query: 264 AAFMHAVRLIRWRGWTTRPEQVLVVLHVAYAFIPVGFIAIALAALDVMDTRSVLHIFTVG 323
           A     +R +RW+ W T  E ++  LH AY  IP+  + +     +     ++LH+F +G
Sbjct: 267 AGVAQLIRFLRWQPWRTFSEPLVWSLHAAYLCIPLSLL-LRGGVSNAWLNHNLLHLFAIG 325

Query: 324 VIGCMMLAVMTRASLGHTGRKLAASRLTIAAYVSLIACALLR-PAAEFLPGVMMHLYGCS 382
            +  ++L+++ R ++GHTGR +        A+++L+  A++R      LP  ++     S
Sbjct: 326 ALSGLVLSMIARVTMGHTGRAIYQGPNMQWAFIALLLAAVVRGVGVGLLPQQLLIWVNLS 385

Query: 383 ALLWIVGFGLFCVEYGPILMRER 405
           A LW++ F LF + +G +L++ R
Sbjct: 386 AALWVIAFALFVLRFGAMLLKPR 408