Pairwise Alignments

Query, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (331), Expect = 2e-35
 Identities = 90/303 (29%), Positives = 153/303 (50%), Gaps = 12/303 (3%)

Query: 22  ASAFLLLVGELLSPGFAQGSQIVRLLTIAAILGIVAAGQNLVILGGREGIDLSVGAMISL 81
           A  FL++V   L+P F     ++ +L   ++  I+A G  LVIL    GIDLSVG++++L
Sbjct: 37  ALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTA--GIDLSVGSVLAL 94

Query: 82  GAVLAGNMMNGQN---AGIPLAILVAGGIPFLIGLINGLGITFVRIPPLVMTLGMTAVIQ 138
               A  ++  +      +P A+L    +    G I+G+ I   ++   + TL    +++
Sbjct: 95  CGAFAATLVAMEVPVLVAVPTALLAGAAL----GAISGIIIAKGKVQAFIATLVTMTLLR 150

Query: 139 GGLVVYSQGVPSGAAAPLLA---GFINRPLIFGIPGVLFVWLGIAAIMLFVLRRTAFGFA 195
           G  +VY+ G P        A    +       GIP  +++ + + A   ++L  T FG  
Sbjct: 151 GVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRY 210

Query: 196 IYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVIGYTGTSFISVGDQYVLPSI 255
           +YA+G NE A  L G+ V  ++  +Y + GL A L G+ V     ++  + G  Y L +I
Sbjct: 211 VYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAI 270

Query: 256 IAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVLITLNLDVWARQIIFGVTLLALMLLYG 315
            AVV+GGTSL GG G  +GT+ GA+ +  L + L  L++  + + I   V +L  +L+  
Sbjct: 271 AAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDN 330

Query: 316 RQK 318
           + K
Sbjct: 331 KNK 333