Pairwise Alignments

Query, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (292), Expect = 5e-31
 Identities = 95/317 (29%), Positives = 160/317 (50%), Gaps = 28/317 (8%)

Query: 19  AIGASAFLLL-VGELLSPGFAQGSQIVRLLTIAAILGIVAAGQNLVILGGREGIDLSVGA 77
           AI A  F+LL +  +  P F     +  +LT +++  I+A G   +I+   +G DLS G 
Sbjct: 18  AIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIV--TQGTDLSAGR 75

Query: 78  MISLGAVLAGNM---MNGQNAGIP-------LAILVAGG-IPFLIGLINGLGITFVRIPP 126
            + L AV++  +   M+  N   P       LA++++   I  +IGL+NG+ + ++++ P
Sbjct: 76  QVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTP 135

Query: 127 LVMTLGMTAVIQGGLVVYSQGVPSGAAAPLLAGFINRPLIFG-----IPGVLFVWLG--- 178
            + TLG   ++ G   +Y   V    A+P+ AGF  R   F      I    F ++    
Sbjct: 136 FIATLGTMIIVYGINSLYYDSV---GASPI-AGFDERFTTFTQGFIRIGDFRFSYITFYA 191

Query: 179 -IAAIMLFVL-RRTAFGFAIYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVI 236
            IA I ++VL  +T FG  I+A+G N  AA + G+ VPL    +Y LSG+F    G+   
Sbjct: 192 IIAIIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEA 251

Query: 237 GYTGTSFISVGDQYVLPSIIAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVLITLNLDV 296
           G  G++  ++G  Y L +I A V+GG S AGG G   G + G +  T++   +  + +  
Sbjct: 252 GRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSP 311

Query: 297 WARQIIFGVTLLALMLL 313
           + + II G  ++  + L
Sbjct: 312 YWQYIIKGSIIIFAVAL 328