Pairwise Alignments

Query, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 332 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  150 bits (378), Expect = 5e-41
 Identities = 97/312 (31%), Positives = 170/312 (54%), Gaps = 9/312 (2%)

Query: 2   TNPGLQLKTIITDPLTIAIGASAFLLLVGELLSPGFAQGSQIVRLLTIAAILGIVAAGQN 61
           T PGL L  + + PL   + A   +  V  LLS  F     +  +    A +G++  GQ+
Sbjct: 13  TAPGL-LARLTSVPLAGVLTALVLIFGVSCLLSEHFLTAYNMTIMARTLAFVGLITIGQS 71

Query: 62  LVILGGREGIDLSVGAMISLGAVLAGNMM--NGQNAGIPLAILVAGGIPFLIGLINGLGI 119
           +++L G   +DLS+GA+  L  V+ G +M   G +  + LA+ +A G+    G+INGL +
Sbjct: 72  MLLLLGE--LDLSLGAIAGLCGVVGGILMVQYGLDPWLSLALCLALGLT--CGVINGLLV 127

Query: 120 TFVRIPPLVMTLGMTAVIQGGLVVYSQGVPSGAAAPLLAGFINRPLIFGIPGVLFVWLGI 179
           T VR+  LV+T+G   +  G  +V ++GV      P    F+ +   +G+P    + + I
Sbjct: 128 TMVRLHSLVLTIGTAGIYGGANLVATKGVAI-TGIPSEISFLGKAAPYGLPVPFLIMVTI 186

Query: 180 AAIMLFVLRRTAFGFAIYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVIGYT 239
             I+ FV+ +T FG  IYAIG+N  AA ++G+    IR  ++ L+G  + L G+ ++   
Sbjct: 187 LVIVSFVIFKTPFGRYIYAIGNNMAAARMLGIRTNAIRVCVFALAGFLSALAGMLMVARL 246

Query: 240 GTSFISVGDQYVLPSIIAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVLITLNLDVWAR 299
           GT+  S+G+ +VL  I A VIGG +  GG G  +G + GA  + I+ ++++   +  + +
Sbjct: 247 GTAQPSIGEGWVLAPIAASVIGGVATTGGIGSPIGAIFGAAIIGIIDNIIVLFGVSPYWQ 306

Query: 300 QIIFG-VTLLAL 310
            ++ G + +LA+
Sbjct: 307 SVVSGTIVVLAI 318