Pairwise Alignments

Query, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 333 a.a., putative ribose transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  115 bits (287), Expect = 2e-30
 Identities = 90/307 (29%), Positives = 147/307 (47%), Gaps = 15/307 (4%)

Query: 25  FLLLVGELLS---PGFAQGSQIVRLLTIAAILGIVAAGQNLVILGGREGIDLSVGAMISL 81
           F  + GE  S     F     ++ LL  +A +GI+A G  +V++ G   IDLSVGA+ ++
Sbjct: 25  FFSVAGEFFSVSDKAFMDTDNMLLLLKQSAPIGIIAMGMTIVMVNGN--IDLSVGAIYAI 82

Query: 82  GAVLAGNMMNGQ------NAGIPLAILVAGGIPFLIGLINGLGITFVRIPPLVMTLGMTA 135
            A++  + M         N  IP+A  +A     ++G INGL +    +   ++TLG   
Sbjct: 83  CAIILLDSMTWTMFAGLGNWVIPVAWCLALLTGVVLGAINGLIVWKTGVDAFIVTLGSML 142

Query: 136 VIQGGLVVYSQGVPSGAAAPLLAGFINRPLIFGIPGVLFVWLGIAAIMLFVLRRTAFGFA 195
             +G + +Y+   P+      L  F     + G+    +  L +   + F++ RT  G  
Sbjct: 143 GYRGLVFMYNGEQPTSHLNWTLVDFAEAQFL-GLHTATWFLLVVTVAIWFLMNRTVHGRN 201

Query: 196 IYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVIGYTGTSFISVGDQYVLPSI 255
            YAIG+N  AA   G+ V     + + + G  A L+ V     +G+   + G  Y L  I
Sbjct: 202 AYAIGNNREAAVNAGIRVGPHMMINFMIIGFLAALSAVVFYSESGSVNPNDGQLYELWVI 261

Query: 256 IAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVLITLNLDVWARQIIFGVTLLALMLLYG 315
            AVV+GGT L GGAG  V T  G +A+ +L+  L  +  D     ++ G+ L+A++ L  
Sbjct: 262 TAVVLGGTKLTGGAGSIVSTFGGVIAIQLLRKGLAHIGADTSTVNLVIGLILIAVLFL-- 319

Query: 316 RQKQLRV 322
             +QL V
Sbjct: 320 -DRQLNV 325