Pairwise Alignments

Query, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  127 bits (319), Expect = 4e-34
 Identities = 99/320 (30%), Positives = 152/320 (47%), Gaps = 24/320 (7%)

Query: 5   LMAAAAMVLAA-GTSVHAQEQSFKIGLSNSFVGSEWRTQMIEEAQAAAKAWGEKGVKVEV 63
           L+A+AA+  AA   S  A   + KI LSN++ G+ WR  M+   +   K  GE  VK  +
Sbjct: 7   LLASAAITCAAMPASAFADTSAKKIALSNNYAGNSWRQAMLTSWE---KVTGE-AVKAGI 62

Query: 64  VVQS-----GNVDVQGQIGHIRNFMNQGVDAILINPGSPTAFDPIFAQAKARNILVIATD 118
           V  +            Q   I+N + QG DAI++N  SPTA +    +A    I V++ D
Sbjct: 63  VASADAFTTAENQATEQAAQIQNMILQGYDAIVLNAASPTALNGAVKEACDAGITVVSFD 122

Query: 119 AEVSSKDALYVGIDQKAWAAQSAQWLADALKGKGSVVAINGIAGNPANEARVAGYREVFK 178
             V+   A  + +D K       ++L++ L   G+++ I G+AG   ++   AG  E  K
Sbjct: 123 GIVTEPCAWRIAVDFKEMGRSQVEYLSNKLPDGGNLLEIRGLAGVFVDDEISAGIHEGVK 182

Query: 179 KYPDIKVLNEANASWDQAQGQQAMQNLLATYPDISGVWVQDGMADGAWRAIEAAGKTKDI 238
           ++P  K+    +  W Q   Q+A+  +L + PDI GV  Q G   GA +AI A  +   I
Sbjct: 183 QFPQFKIAGSVHGDWAQDVAQKAVAGILPSLPDIVGVVTQGGDGYGAAQAIAATDRKMPI 242

Query: 239 AATGEIRKDFMTRWEKEKFNSG---ASVN-PPGVMASALNVAVLKLQGKEFKDGIFGGTY 294
              G  R+D +  W+++K  +G    SV+  PGV   A  VA   L GKE K  +     
Sbjct: 243 IVMGN-REDELKWWKEQKDANGYETMSVSIAPGVSTLAFWVAQQILDGKEVKKDL----- 296

Query: 295 GNAVYIPIPFVSSDNLADNI 314
                +P   +  DNL  N+
Sbjct: 297 ----VVPFLRIDQDNLEANL 312