Pairwise Alignments

Query, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 355 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  123 bits (308), Expect = 8e-33
 Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 11/283 (3%)

Query: 11  MVLAAGTS----VHAQEQSFKIGLSNSFVGSEWRTQMIEE-AQAAAKAWGEKGVKVEVVV 65
           ++LAAG++            KI LSN++  + WR  M++  A  A  A   K V      
Sbjct: 24  LMLAAGSASAQVATGDTSQAKIALSNNYAANAWRQSMLKTWAATADDAVKRKLVAAAPAF 83

Query: 66  QSGNVDVQGQIGHIRNFMNQGVDAILINPGSPTAFDPIFAQAKARNILVIATDAEVSSKD 125
            +       Q   I+N + QG  AI+++  SPTA +    +A A  ++V++ D  V+   
Sbjct: 84  TTSENQPTEQAQQIQNLILQGYKAIVVDAASPTALNGTIKKACAAGVVVVSYDGVVTEPC 143

Query: 126 ALYVGIDQKAWAAQSAQWLADALKGKGSVVAINGIAGNPANEARVAGYREVFKKYPDIKV 185
           A  V  D +    +   +LA+ L GKG+++ I G+AG   +    AG  +  KK+P +KV
Sbjct: 144 AYRVTFDFRKMGERQIDYLAERLNGKGNILEIRGLAGVSVDGEIHAGIMDGLKKHPGLKV 203

Query: 186 LNEANASWDQAQGQQAMQNLLATYPDISGVWVQDGMADGAWRAIEAAGKTKDIAATGEIR 245
           +   N  W Q   Q+A+  +L T P I GV  Q G   G  +A +AA +   I   G  R
Sbjct: 204 VGSVNGDWAQTVAQKAVAGILPTLPKIDGVVTQGGDGFGVAQAFKAANRELPIIILGN-R 262

Query: 246 KDFMTRWEKEKFNSG----ASVNPPGVMASALNVAVLKLQGKE 284
           +D + +W K +  SG    ++ NPPG +  A  VA   L GK+
Sbjct: 263 EDEL-QWWKTQIPSGYKTYSASNPPGAVTVAFWVAQQVLAGKK 304