Pairwise Alignments

Query, 354 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N1B4

 Score =  120 bits (301), Expect = 5e-32
 Identities = 93/314 (29%), Positives = 157/314 (50%), Gaps = 15/314 (4%)

Query: 1   MKGIRQLADYLQISIGTVSRALNGKPDVNEETRRRVLEAAEKLGYVANQSGRSLRQGTTN 60
           M  I+ +A    IS  TVS  +N    V+EE R +V  A + L YV +   RSL+  TT 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRVKVEAAIKSLDYVPSAVARSLKAKTTA 60

Query: 61  VIGLMTGSDAQTVENSDN-FFLGVTDGLQSVFSGHNLDLIVLPCPGEEDPDE---YLKRM 116
            IGL+       V NS N +F  +  G++     +   +I+  C  +++PD+   YL+ +
Sbjct: 61  TIGLL-------VPNSLNPYFAELARGIEDYCERNGYCVIL--CNSDDNPDKQRSYLRVL 111

Query: 117 VARRMVDAMIISATRRTDKRVDFLKQNRLPFVALGRTASSDDHAWIDLDFEGVAKNAVDR 176
           + +R +D +I+++        + L   R P V + R     D   + +D E  A  A   
Sbjct: 112 LEKR-IDGLIVASAGGDSGLAEGLAGVRTPMVIVDRGLEGLDADLVRIDHEYGAYLATRH 170

Query: 177 LVAAGHRSIAVAAPDSDINLGYVFLEGYRRALEDNGIPYDSSLVVRAKSSEQGGYHAASE 236
           L+  GHR IA     +  ++  + L GY RAL++ G+      ++ +  +  GGY+AA+ 
Sbjct: 171 LLDLGHRDIATIGGPASTSVAQMRLAGYCRALKEAGVEVPRERMLESDFTSTGGYNAAAI 230

Query: 237 WLQMRPRPTAIVLIYELMAVGLYRRLAEAGLKPGQDLAVIGFRDGPRGQFLEPRLTSFRT 296
            L+  P P+AI    +++ +G+ R  AE  ++   +L+VIGF D    +++ P LT+   
Sbjct: 231 LLENNP-PSAIFAGNDMIGIGVLRAAAERNIRVPTELSVIGFDDIQMSRYVYPALTTVGQ 289

Query: 297 SLHDLGVTVAQTLL 310
           S+  LG   A+ LL
Sbjct: 290 SILQLGEMAAEVLL 303