Pairwise Alignments

Query, 354 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (279), Expect = 2e-29
 Identities = 93/339 (27%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 1   MKGIRQLADYLQISIGTVSRALNGKPDVNEETRRRVLEAAEKLGYVANQSGRSLRQGTTN 60
           M  I  +     +S  TVSR LN    V  +TR  VL A ++LGY  N   ++L   TTN
Sbjct: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69

Query: 61  VIGLMTGSDAQTVENSDNFFLGVTDGLQSVFSGHNLDLIVLPCPGEEDPDEYLKRMVARR 120
            IGL+      +   S  F      G Q         L+V+     E  ++     +A +
Sbjct: 70  SIGLVLPHFESSYFGSILF--EAEQGAQKA----GKKLLVMNSKNSEQGEKEAVATLAAQ 123

Query: 121 MVDAMIISATRRTDKRV-DFLKQNRLPFVALGRTASSDDHAWIDLDFEGVAKNAVDRLVA 179
             DA+++ +    + ++ +  +Q+  P V L R           LD   +A+ A+  L+ 
Sbjct: 124 RCDAILLYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLN 183

Query: 180 AGHRSIAVAAPDSDINLGYVFLEGYRRALEDNGIPYDSSLVVRAKSSEQGGYHAASEWLQ 239
            GHR IA          G +  + Y++AL + GI   SSLV+   ++  GGY A  + LQ
Sbjct: 184 LGHRQIACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQ 243

Query: 240 MRPRPTAIVLIYELMAVGLYRRLAEAGLKPGQDLAVIGFRDGPRGQFLEPRLTSFRTSLH 299
                TA+    + MA+G  R + E G+   + +++IG  + P   F  P L+S    + 
Sbjct: 244 QGISMTAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIG 303

Query: 300 DLGVTVAQTLLSTMPAYAPFYPDQARHRVWPMLLVPGES 338
           +L     Q  +S     A   P  A+HR++   L+  ES
Sbjct: 304 EL----TQQAISLAVEIANKKPQDAQHRLYQGSLIARES 338