Pairwise Alignments

Query, 300 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 293 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  110 bits (274), Expect = 5e-29
 Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 18  LVALP-LGFLFVMAGLPLIYNIVMSFQEVDMFSLGTFVRPFVGFKNYVDLFRQPETLPIL 76
           L+ LP + F+     +P +   + SF    +   G     FVG ++Y+ LF        L
Sbjct: 14  LLLLPAMAFIVAFTHVPAVNTFIHSFM---LDGKGGAPATFVGLEHYMYLFEDEVFRKAL 70

Query: 77  MNTVTFVVASIAGQFAIGFGLALFFWVN--FPGATWLRGLFLVSWVMPGLVVGAIWNWIL 134
           +N + F   +I    +IG  + + F VN    G + LR  + V  V+P + V  IW +  
Sbjct: 71  VNNLLFASGTIP--LSIGLAMLMAFMVNAGLAGQSVLRLCYFVPTVLPMIAVANIWLFFF 128

Query: 135 SGDFGVLNFFLRESGLISGNIFWRSDANFSLWAVVIANIWLGTSFNMILLSVGLASIPGD 194
           + ++G+L       G    N  W  + + +L  V+   +W    F MI     L  I   
Sbjct: 129 TPEYGLLEQVRGALGFSGVN--WLGNESTALPCVIAVAVWKDAGFFMIFYLAALQQISPS 186

Query: 195 LYEAAELDGASAWQRFYTITLPMMRSTIGAIVSLGLIFTLQQFDLFAAITDGGPNNSSNV 254
           L EAA L+GAS    +  + +P++  T   ++    I   +  D    +T GGPNN+S++
Sbjct: 187 LGEAAMLEGASRLYFYRRVVIPLLMPTTLFVLVNATINAFRMVDHLFVLTQGGPNNASSL 246

Query: 255 AQYWAWDLSFRQYDFAKGATISVIMIVFVMLASI 288
             Y+ +++SF+ +D   GA ++++++ F+ LASI
Sbjct: 247 LLYYIYEVSFKYWDTGYGAALTMVLLAFLGLASI 280