Pairwise Alignments

Query, 361 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 393 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Vibrio cholerae E7946 ATCC 55056

 Score =  295 bits (755), Expect = 1e-84
 Identities = 164/349 (46%), Positives = 217/349 (62%), Gaps = 12/349 (3%)

Query: 10  VNKYYGAFHALKNIDLSIKKGTFVALVGPSGCGKSTLLRSLAGLESISAGDMRIAGTLMN 69
           V  Y     A+K +DLSI +G F+ LVGPSGCGKS++LRS+AGLESI++G++ +AG  ++
Sbjct: 29  VKTYDNGHQAVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEIHLAGRRVD 88

Query: 70  GVPPRKRDVAMVFQSYALYPHMTVEENLTYSLRMRGVAKAEARKAAEEVAATTGLSKLMK 129
              P  RD+AMVFQ+YALYPHM+V +NL Y L+ RGV K        +VA T  + + + 
Sbjct: 89  NEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTLKIEEYLD 148

Query: 130 RYPRELSGGQRQRVAMSRAIIRNPQAFLFDEPLSNLDAALRVHMRKEIRALHDRLHATSV 189
           R P +LSGGQRQRVAM RAI+R+PQ FLFDEPLSNLDAALR HMR EI+ L   L  TSV
Sbjct: 149 RKPAKLSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQRELGVTSV 208

Query: 190 YVTHDQIEAMTMADHVVVMRDGVIEQQGTPLELYDRPVNRFVAGFIGSPAMNFIPAMVSS 249
           YVTHDQ+EAMT+AD +VV++ G IEQ GTP E+Y +P + FVA FIGSPAMNF+PA +  
Sbjct: 209 YVTHDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMNFLPASIKQ 268

Query: 250 DGASLLLQFGEGEPQQSIRAPAPLPPGKRIIVGIRPEHIRPATATGA-ALTLPVSTVETT 308
               +         +            + I +GIRPEH      T A  L L +  VE  
Sbjct: 269 GQLHI-------AGKHCYLPQFDAMSSENITLGIRPEHASLHPLTNAIELKLDIQVVEPL 321

Query: 309 GSATFL---TLGTTTEV-VIAIQGRSEVRSGEVVGLDINPTDLHLFDEE 353
           G    +    +G  +E   IA+     +   + + + +    LHLFD++
Sbjct: 322 GPNQLVHGKIIGLESEQDFIAVTAEIPLDVHQTLPIWVALEQLHLFDQQ 370