Pairwise Alignments

Query, 816 a.a., VgrG protein from Agrobacterium fabrum C58

Subject, 958 a.a., Rhs element Vgr protein from Pseudomonas syringae pv. syringae B728a

 Score =  160 bits (404), Expect = 4e-43
 Identities = 192/854 (22%), Positives = 334/854 (39%), Gaps = 114/854 (13%)

Query: 12  QASRVLKVSSPLGEDQLLPERLSVEEGVSQLFEIRLTVRAKKEAVKPEELIGRLVDVSIE 71
           QA R+L++++P G++ L   R    E +S +    + V  +     PE+LIG+ V +SI 
Sbjct: 18  QAGRLLELNTPQGQE-LFALRAHAVERLSHVARYTVDVINQTTDFDPEKLIGQAVQLSIR 76

Query: 72  ISQGDGDGGGVRRPFNGLVTELH----EGPPITRGMRSYALTIRPQMWLLSRRSDCRIWM 127
           +  G         P +G V  +     +G     G+  + L   P   LL  R DCRIW 
Sbjct: 77  LDDGS------LSPRHGWVESVRYLGSDG-----GLEDWQLVFAPWFSLLEYRIDCRIWQ 125

Query: 128 DKTAVEIVETLFSEHG-IPAPDTSGIISPPPAQHYSVQFNETDLDYLTRRFEEDGLFYWF 186
           + +  +I+  +F  +    A     +    P   Y  QFNETD +++ R  E++GLF++ 
Sbjct: 126 EMSLPDILAQVFQHYSQARANYRFDLQRDYPLLSYVTQFNETDANFVQRWCEQEGLFWYV 185

Query: 187 SHEDGSHKLHVADSASGWLGPSPAAQGEGMVRLAQGSSDRNHINDWARRFSYVSG--QRA 244
            H+  SH +   D+       +PA+         Q +  ++ I  W+     ++G  Q  
Sbjct: 186 EHKVDSHCIVFTDNIDSLPTLNPASL---RFHTQQAADLKDSITQWSPGARLLNGLVQWR 242

Query: 245 GADWNFETPGMVPGTMTPSLVQMPDATKRELYEYPARIKTVEEAERAQKLRTQAIEADHD 304
            +++       +  +M       P   +R  Y      + +   E   +++ +  E+   
Sbjct: 243 SSEYRSHAQPQITHSMALPAASAPPDLERYQYRGQYAWQNLGRGEWLARVQIEQDESAAR 302

Query: 305 RVFGSSTTRILEAGRRFTPFEVAHPEHAYEEHVIVRASHSIVDLSYETNSNEPE------ 358
           R+ G    R ++ G  F   +  HP   YE   +      IV + +   SN P       
Sbjct: 303 RIQGQGGARQMQPGHGFELTQ--HP--LYELKPLQDRQFLIVAVEFFVQSNLPIGKTRSS 358

Query: 359 -------------------------YRNHFEAIPARVPLTPHRSTKRPRIEGTQVAIVAG 393
                                    Y N FE     +P     + ++P   G Q A+V  
Sbjct: 359 PPGSLKTQLDALQTQASLPAGDEGFYLNRFETQRLDIPYRSAFTHQKPAHPGPQTAVVVT 418

Query: 394 PEGEEIHPDQYGRIKLWFPWDRKAKKDGTDTCWVRVSQAWGGGTWGAQVIPRIGMEVMVA 453
           P G E+  D   R+ + F WDR  K     +CW+R+ Q+  G  WG+  +PR G EV+V 
Sbjct: 419 PGGHEVFTDNLNRVCVRFHWDRLVKDGELGSCWLRMMQSSSGQDWGSVNVPRAGEEVVVT 478

Query: 454 FVDGDPDKPLVIGVV---NNPANSVPYDLPANKTRMVLRSNSHKGDGFNEITFEDEAGKE 510
           F+D D D+PL++G V   + PA        ++      +S   +G G+N+   +D  G+ 
Sbjct: 479 FLDNDIDRPLIMGQVYGGHKPA------WHSSGLMSGYKSQEIQGSGYNQWVMDDSTGQV 532

Query: 511 NQFFHA--------------QKDQTTRVLNDRTKRIDRHEVASVGGNRAVEVSGNQKHEI 556
               H+              Q+  +   L      +      ++   + + +S   +++ 
Sbjct: 533 RTQIHSSHGHSQLNLGYLIDQQGNSRGALRGAGFELRTDAYGALRAQQGLYLSTWPRNKA 592

Query: 557 -GGSVNTVVGGTGPMAMMAMAGVQALSGQTAGLLSQAAQIAGGGGPGVAAFATTLASSAL 615
            GG ++T        A   ++  QA   +   L   A Q      PG       L +   
Sbjct: 593 QGGQIDT------QEAQQHLSNAQA---RVKALSEIAEQHNALPMPGGIESLDQLNADTQ 643

Query: 616 GFLGAGGLSSREGVVSGPSPRADAGTALAGSGSGVGSDASGLFPL-----PGIMNTIIGA 670
              G+GG S    V S P  R    T  A    G G  +    PL     P  + T+   
Sbjct: 644 ANYGSGGESP---VSSSPQQRNGGDTKAAIMSGGRGQTSGYKKPLLVASSPADIATVTP- 699

Query: 671 FQSTSVGVAKAEQVGVSKVTNIGQTEVRQVGKQQNLTI-----GKEQFVEIGTGQYTRVG 725
            Q+T +   K   +   + TN+   +   V   Q++++     G + F   G  +     
Sbjct: 700 -QNTHIHSGKQLTLSTGEDTNLASGKSLLVSVAQSISLFAQAAGAKLFAAKGKVEIQAQN 758

Query: 726 EKITINVGKLYNLVSEEKYHGEAKVWEIFADDEIRLSTPGGYISLTKSGIKLFAL-KIDI 784
           + I +   +   + S       A+  EI A +EI L++   YI +    I++ A   ID+
Sbjct: 759 DSIELTAKESVRITS------TARTIEIAAQEEILLTSGAAYIRIKGGNIEIHAPGTIDV 812

Query: 785 EGNQINFKKGGPGE 798
           +G +  F   GP +
Sbjct: 813 KGVKKTF--DGPAQ 824