Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 847 a.a., ClpB protein from Pseudomonas fluorescens FW300-N2E2

 Score =  650 bits (1678), Expect = 0.0
 Identities = 389/863 (45%), Positives = 521/863 (60%), Gaps = 46/863 (5%)

Query: 4   IDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVD--AGIYAETFDELKIP 61
           ++L  L+G L PD R  LE AA   ++  H YV+I H LL ++D   G +A       + 
Sbjct: 1   MELASLIGRLNPDNRRALERAAQRCMQRSHHYVEIEHLLLELLDIEGGDFACLLPRFGLE 60

Query: 62  LPVLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDE 121
              +  E  ++L+    G     +LS   +    +A + AS+  G D +    LLLA+ +
Sbjct: 61  RDAVATETNKALDLFKSGSTRTPALSAQTIGLLEDAVVQASV-LGLDSIRSGLLLLALLD 119

Query: 122 ETSLRSFVRSAFPSLKAMDRGAL-----ERLRSSAENGAGVDVPSALTSSGEAGSAQAAG 176
               RS + ++  SL  + R AL     E   SS E+  GV         GE    Q   
Sbjct: 120 RDERRSLLLNSASSLLRIPRDALRAHLLEWTESSREHVGGVRP----AKPGEPPQKQ--- 172

Query: 177 QNDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVA 236
            +  L  YT D+T DAR G++DP++GRD E+RQ +DIL RRRQNNPILVG  GVGKTAV 
Sbjct: 173 -DPVLDQYTQDLTADARAGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVV 231

Query: 237 EALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPVILF 296
           E LAL IA+G+VP  L+ V L  LD+ LLQAGAGVKGEFE+RL GVIDAV+ + +P+ILF
Sbjct: 232 EGLALRIAAGDVPPSLQEVTLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSAEKPIILF 291

Query: 297 IDEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPV 356
           IDEAH L+GAGGA G  DAAN+LKPALARGE+RT+AATTW EYKKYFEKD AL RRFQ V
Sbjct: 292 IDEAHTLIGAGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALARRFQLV 351

Query: 357 HVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVSLLDT 416
            V EPDE TA+ MLRGVA     HH V V D AI  AV+LS RY+  RQLPDKA+S+LDT
Sbjct: 352 QVEEPDELTAVEMLRGVASKLEQHHGVQVLDAAIHEAVKLSHRYISGRQLPDKAISVLDT 411

Query: 417 AAAAVSLARQTLPERLRAMESERHLLSDELNWLLREPQ------------DEDMQNRIQS 464
           A A V+L +  +P  L ++   ++ L DE+  L RE              + +  + +Q+
Sbjct: 412 ACARVALGQHDVPPPLESLRHRQNSLKDEVERLRREQATGLDHRERITLLEAESTSNVQA 471

Query: 465 IRDELERLEAGIDDLRGRYDA--EMAELAALSEEQPAETGASN-VSHLRPATEMRPANA- 520
           IR+   R     + +R   D   E+  L+  ++ + A+T   N + HL  A E+    A 
Sbjct: 472 IRELETRWGEEREAVRELLDTRRELLTLSERADSEKADTEIDNRIDHL--AAELLRLEAG 529

Query: 521 -------ERLVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAA 573
                  + LVP  VD + +AAV++ WTGIP+GK+LAD+  + RTL  RM QRV+GQ  A
Sbjct: 530 LDAIRQDDPLVPEQVDSKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGQRVMGQSTA 589

Query: 574 ITRIADAMRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSE 633
           +  IA  ++  RAGL+DP++P  VF LVG +G GKTETA +LAD LYGG  +L +IN+SE
Sbjct: 590 LNTIAQRLQAYRAGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSE 649

Query: 634 FKEEHKVSLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDK 693
           ++E H VS L G+PPGYVG+G GGVLTEAVRR+P+ V+LLDEI+KAHP V + FY VFDK
Sbjct: 650 YQEAHTVSQLKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDK 709

Query: 694 GVLRDGEGRDVDFKNTTIFMTANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPA 753
           G++ DG G  VDFKNT +  T+N G+EL   L   P      +A    L   L + F+PA
Sbjct: 710 GLMEDGTGLVVDFKNTVMLATSNVGAEL---LLDTPTAQLGSDAFNEALHKVLLQAFRPA 766

Query: 754 FLGRTIILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEI 813
           FL R  ++ + PL    L  +V  ++ K+R R  A  G           A++A+  A+  
Sbjct: 767 FLARMTVVAYRPLDEATLEGIVLAKLEKLRGRYKAATGKQFEFDAGIVKAVLAKCSAA-- 824

Query: 814 GARAIEIMIGKDLLPPLSSFFLE 836
           GAR +E ++   +   L+ + LE
Sbjct: 825 GARDVENVLMTQVTGKLAEWVLE 847