Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 877 a.a., type VI secretion ATPase, ClpV1 family from Marinobacter adhaerens HP15

 Score =  628 bits (1620), Expect = 0.0
 Identities = 374/884 (42%), Positives = 519/884 (58%), Gaps = 40/884 (4%)

Query: 1   MSHIDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVDAGI--YAETFDEL 58
           M  ++L  L+G L    R  LEA+A++ +      +   H L  +++       +  +  
Sbjct: 1   MIRVELPALIGRLNDMSRQALEASAALCISRQGAEITPAHLLFKLLETPFSDVRQILEHT 60

Query: 59  KIPLPVLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLA 118
            +    L+  +G SL           S S  ++   ++AW+LAS E G   +    + LA
Sbjct: 61  GLEHQQLQPLVGDSLNGESQSAEPYPSFSPLLVELMQDAWLLASTELGHTELRSGAVFLA 120

Query: 119 MDEETSLRSFVRSAFPSL-KAMDRGALERLRSSAENGAGVDVPSALTSSGEAGSAQAAGQ 177
           +     L +  R   P + KAM     E+LR   +            S  E G   A+  
Sbjct: 121 L-----LMNADRYLMPRVAKAMVDINREQLRKQFDRFTEGSAERLEPSEQEPGQPVASVD 175

Query: 178 NDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVAE 237
            D L+ Y  D T  AR  K+DPV+ RD E+ Q++DIL RRR+NNPI+VG+AGVGK+AV E
Sbjct: 176 LDPLKRYATDFTRLAREDKLDPVVCRDAEIDQMIDILCRRRKNNPIVVGDAGVGKSAVVE 235

Query: 238 ALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPVILFI 297
            LAL I +G+VP++L++V L  LD+  LQAGA VKGEFE+RL GVI+AVK SA P+ILFI
Sbjct: 236 GLALRIVNGDVPDRLKSVELWTLDMGALQAGASVKGEFEKRLKGVIEAVKGSATPIILFI 295

Query: 298 DEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPVH 357
           DEAH L+GAG + G  DAAN+LKPALARGE+RT+AATTW EYKKYFEKD AL+RRFQPV 
Sbjct: 296 DEAHTLIGAGNSEGGSDAANLLKPALARGELRTIAATTWREYKKYFEKDPALSRRFQPVA 355

Query: 358 VREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVSLLDTA 417
           + EP    A+ +LRG+   +   H V + D A+ AA ++SARY+  RQLPDKA+ +LDTA
Sbjct: 356 LDEPTPGEAVHILRGLRTVYEKAHQVLIADSALKAAAEMSARYLAGRQLPDKAIDVLDTA 415

Query: 418 AAAVSLARQTLPERLRAMESERHLLSDELNWLLRE---------PQDEDMQNRIQSIRDE 468
            A VSL     P RL  + SE + L+ E N L RE          ++ +++ R+  I  E
Sbjct: 416 CARVSLNLSAPPRRLSRVRSELYQLAMEQNLLCREHTLGQTVDAERERELEQRVAGITVE 475

Query: 469 LERLEAGIDDLRGRYDAEMAEL--AALSEEQPAETG----ASNVSHLRPATEMRPANAER 522
              LE    D R    A + E+    L+ E  AE         ++  RP  +   A  E+
Sbjct: 476 SAALEQRWSDQR-ELVARLVEIREKLLTGESQAEANTPELTDGITEERPDLKSEAAAIEQ 534

Query: 523 ----------LVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDA 572
                     LV T VD   +A V++ WTGIP+ ++  D++E    L   +++ + GQD 
Sbjct: 535 ELTELQADEPLVHTRVDARQVAEVIADWTGIPVNRMTTDELEKITHLPAYLQEHIKGQDT 594

Query: 573 AITRIADAMRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMS 632
           AI  +   + TARA L  P RP   F LVG SG GKTET + LA+LLYGG   LTTINMS
Sbjct: 595 AIDCLHQHLLTARADLRRPGRPMGAFLLVGPSGVGKTETVVQLAELLYGGRQFLTTINMS 654

Query: 633 EFKEEHKVSLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFD 692
           E++E+H VS L+GSPPGYVGFGEGG+LTEA+R++P+ V+LLDE++KAHP V ++FYQ FD
Sbjct: 655 EYQEKHTVSRLIGSPPGYVGFGEGGILTEAIRQKPYSVVLLDEVEKAHPEVLNLFYQAFD 714

Query: 693 KGVLRDGEGRDVDFKNTTIFMTANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKP 752
           KG L DGEGR +D KN   F+T+N G + +   +  P ++ E       L PEL   FKP
Sbjct: 715 KGELADGEGRLIDCKNVVFFLTSNLGYQTIVNHAESPASLDEA------LYPELASFFKP 768

Query: 753 AFLGRTIILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASE 812
           A L R  ++P++PLG E L  +V  ++ ++ D++ A Y T++ L +   +A+  RA  SE
Sbjct: 769 ALLARMEVVPYLPLGEETLNRIVGDKLQRLADQIKARYHTEVELEEGLIEAIRNRATRSE 828

Query: 813 IGARAIEIMIGKDLLPPLSSFFLEKVIAGERVGKIVVDFGENGF 856
            GAR +E +I  +LLPP+S   LEK+ A E V K+ +   E+ F
Sbjct: 829 NGARMLESIIEGELLPPVSLALLEKLAAREPVKKVTLAVEEHRF 872