Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 889 a.a., ATPase from Herbaspirillum seropedicae SmR1

 Score =  652 bits (1682), Expect = 0.0
 Identities = 378/883 (42%), Positives = 521/883 (59%), Gaps = 34/883 (3%)

Query: 4   IDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVDA--GIYAETFDELKIP 61
           I+L  L+  L    R+  E AA++ V   H  VD+ H  LA+++     ++       I 
Sbjct: 3   INLRSLICKLNETARLATERAATLCVSCSHYEVDLEHLFLALLEQPQSDFSLIARRSGID 62

Query: 62  LPVLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDE 121
              L+A++   +     G+     LS ++ T     W++ASLE     V    LLLA+  
Sbjct: 63  TDGLQADLEHEISTFREGNARTPVLSPHLRTLFENGWLIASLEESNPSVRSAHLLLALLT 122

Query: 122 ETSLRSFVRSAFPSLKAMDRGALERLRSSAENGAGVDVPSA-LTSSGEAGSAQAAG---- 176
           ++ L      A+   K   +  ++ ++ +        V SA +  +G+ G  ++ G    
Sbjct: 123 QSDLSQL---AYRGSKLFAKFKIDEIKHNLHRLTEGSVESAAIGKTGQGGDRESGGDPMG 179

Query: 177 --------QNDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEA 228
                   +   L  YT  +T  AR+GK+DPVIGRD E+RQ VDIL RRRQNNPIL GEA
Sbjct: 180 ELKQLRIGKMTALDQYTTQLTQRARDGKIDPVIGRDAEIRQAVDILLRRRQNNPILTGEA 239

Query: 229 GVGKTAVAEALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKR 288
           GVGKTAV E LAL IA G+VP+ L+ V +  LD+ LLQAGA VKGEFE RL  VID VK+
Sbjct: 240 GVGKTAVVEGLALRIAQGDVPKPLQGVEIHTLDMGLLQAGASVKGEFESRLKTVIDEVKK 299

Query: 289 SAEPVILFIDEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAA 348
           SA P+ILFIDEAH ++GA G AGQ DAAN+LKPALARGE+RT+AATTWSEYKKYFEKDAA
Sbjct: 300 SAYPIILFIDEAHTMIGAAGQAGQSDAANLLKPALARGELRTIAATTWSEYKKYFEKDAA 359

Query: 349 LTRRFQPVHVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPD 408
           L RRFQ + V EP E  A  MLR +      H  V V DEA+V AV+LS RY+  RQLPD
Sbjct: 360 LARRFQVIKVEEPGEDVACAMLRAMVPLMEQHFGVRVYDEAVVEAVRLSHRYISGRQLPD 419

Query: 409 KAVSLLDTAAAAVSLARQTLPERLRAMESERHLLSDELNWLLRE-PQDEDMQNRIQSIRD 467
           KA+S+LDTA A V+L R   P  L  +      L  E++ L RE       + R+ S+ D
Sbjct: 420 KAISVLDTACAKVALGRDATPALLEGVTRRLERLDTEISALRREAASGSQHEERLASLLD 479

Query: 468 ELERLEAGIDDLRGRYDAE-------MAELAALSEEQPAETGASNVSHLRP-----ATEM 515
           +     A   DL+ R++ E           A L      +    NV   R        E+
Sbjct: 480 QHVCAVAERHDLQLRWEQERELNERIQQARATLENPGTGDARGGNVDAARAELKQLLDEL 539

Query: 516 RPANAER-LVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAI 574
           R    +  +VP  VD   +A +V+ WTGIPLGK++ D+I++   LD  +++RV+GQ  A 
Sbjct: 540 RQRQGDAPMVPIQVDGHVVAEIVAAWTGIPLGKMVKDEIQTVLDLDALLQERVLGQPQAT 599

Query: 575 TRIADAMRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEF 634
           + +A  +RT+RA L DP +P  VF  VG SG GKTETAL+LAD+LYGG   L TINMSE+
Sbjct: 600 SAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINMSEY 659

Query: 635 KEEHKVSLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKG 694
           +E H VS L GSPPGYVG+GEGGVLTEAVRR P+ V+LLDE++KAH  V ++F+QVFDKG
Sbjct: 660 QEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHADVLELFFQVFDKG 719

Query: 695 VLRDGEGRDVDFKNTTIFMTANTGSE--LLSALSADPDTMPEGEALEALLMPELTKQFKP 752
           V+ D EGR++DFKNT I +T+N  S   + + L+   + +P  E L+ L+ P+L K FKP
Sbjct: 720 VMDDAEGREIDFKNTIIILTSNVASAQMMQACLNKSQEELPTPEELDTLIRPQLIKTFKP 779

Query: 753 AFLGRTIILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASE 812
           AFLGR  ++P+ P+    L  ++ +++ +I  RV   +  +     A  +A++ R    +
Sbjct: 780 AFLGRLKVVPYYPIADVVLVEIIKLKLARIAKRVAENHRVEFSYDKALVEAVLGRCTEVD 839

Query: 813 IGARAIEIMIGKDLLPPLSSFFLEKVIAGERVGKIVVDFGENG 855
            GAR ++ ++   LLP ++   L ++  G  + +I V   + G
Sbjct: 840 SGARNVDNILSGTLLPAVAESVLVRMAEGVEIRRIKVSASKKG 882