Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 891 a.a., ATPase from Burkholderia phytofirmans PsJN

 Score =  671 bits (1732), Expect = 0.0
 Identities = 397/900 (44%), Positives = 538/900 (59%), Gaps = 55/900 (6%)

Query: 6   LNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVD--AGIYAETFDELKIPLP 63
           LN L+  L P  R     AA+  +  GH  VD+ H LL ++D  A   A      +I   
Sbjct: 5   LNTLIAKLNPTCRQAALLAANNCLARGHYEVDLEHLLLPLLDEPASDVALVLRASRIDPH 64

Query: 64  VLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDEET 123
            L+A++ R L+    G+      S++++    +AW++ASL++   R+    LLLA+    
Sbjct: 65  ALRADLERELQRLKTGNTRTPVFSKHLIELLEQAWLIASLDSQIGRIRSGHLLLALLSAP 124

Query: 124 SLRSFVRSAFPSLK------------AMDRGALERLRSSAENGAGVDVPSALTSSGEAGS 171
            L  F     P L+             +  G+ E   S+    AG      + S+   G 
Sbjct: 125 DLAQFAERMSPLLRDVRVTDLKHKFDELTAGSREVEHSNDTQSAGDSASDPVASAVAPG- 183

Query: 172 AQAAGQNDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVG 231
             A  +   L  YT ++T  AR GK+DPVIGR+ E+RQ +DIL RRRQNNPI+ GEAGVG
Sbjct: 184 --APSKTPALDTYTSNLTQRAREGKIDPVIGREGEIRQAIDILMRRRQNNPIMTGEAGVG 241

Query: 232 KTAVAEALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAE 291
           KTAV E LAL IA+ +VP  L+ V L  LD+ LLQAGA VKGEFE RL  VID VK+S  
Sbjct: 242 KTAVVEGLALRIAADDVPAPLKGVALHVLDMGLLQAGASVKGEFENRLKNVIDEVKKSPH 301

Query: 292 PVILFIDEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTR 351
           P+ILFIDEAH ++GAGG AGQ DAAN+LKPALARGE+RT+AATTWSEYKKYFEKDAAL R
Sbjct: 302 PIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR 361

Query: 352 RFQPVHVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAV 411
           RFQ V + EP EA A  MLRG+A     H NV V D+AI  AV+LS RY+  RQLPDKA+
Sbjct: 362 RFQVVKIEEPSEALAAAMLRGMASLMEKHFNVRVLDDAITEAVRLSHRYISGRQLPDKAI 421

Query: 412 SLLDTAAAAVSLARQTLP----------ERLRA------MESERHLLSDELNWLLREPQD 455
           S+LDTA A V+LA  + P          ER+ A       E+    L DE    LR  ++
Sbjct: 422 SVLDTACAKVALAHSSTPATIDDTKKRLERIDAEIAALEREAASGALHDERLAELRGLRE 481

Query: 456 EDMQN-RIQSIRDELER-LEAGIDDLRGRYDAEMAELA----ALSEEQPAETGASNVSHL 509
           ED+++      R + ER L   I  LR   DA     A    A   +Q  E  A+ V+ L
Sbjct: 482 EDLKDLAADEARYDKERVLVTEIVGLRADIDAARVNSAGPEQADKAQQAREKLAARVAEL 541

Query: 510 RPATEMRPANAERLVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVG 569
                 +P     +VP  VD   +A +V+ WTGIPLG+++ D+I++   L   +  RV+G
Sbjct: 542 HALQGGQP-----MVPLQVDAHVVAEIVASWTGIPLGRMVKDEIQTVLNLQPLLAARVIG 596

Query: 570 QDAAITRIADAMRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTI 629
           QD A+  IA  +RTA A L DP +P  VF  VG SG GKTETAL+LAD+LYGG   + TI
Sbjct: 597 QDHALEAIAQRVRTASANLEDPNKPRGVFMFVGPSGVGKTETALALADVLYGGERKMVTI 656

Query: 630 NMSEFKEEHKVSLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQ 689
           NMSE++E H VS L GSPPGYVG+GEGGVLTEAVRR P+ V+LLDE++KAHP V ++F+Q
Sbjct: 657 NMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPEVLEMFFQ 716

Query: 690 VFDKGVLRDGEGRDVDFKNTTIFMTANTGSE--LLSALSADPDTMPEGEALEALLMPELT 747
           VFDKG + D EGR++DF+NT I +T+N GS+  + + L+   + +P+ + L   L  +L 
Sbjct: 717 VFDKGTMDDAEGREIDFRNTLIILTSNVGSQAVMQACLNKSAEELPDADELAETLRLQLY 776

Query: 748 KQFKPAFLGRTIILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVAR 807
           K FKPAFLGR  ++P+ P+  + LA ++++++ +IR R+ + +       ++  DA++AR
Sbjct: 777 KAFKPAFLGRMKVVPYYPISDDVLAEIIELKLDRIRRRIESNHKAVFEWDESLVDAVLAR 836

Query: 808 AGASEIGARAIEIMIGKDLLPPLSSFFLEKVIAGERVGKIVVDFGENGFGIRAEAAGEAD 867
               + GAR ++ ++   LLP ++   LE+V  G  + +I V         RA  AGE D
Sbjct: 837 CTEVDSGARNVDHILNGTLLPEVAQQVLERVANGAAIERIAV---------RASEAGEFD 887