Pairwise Alignments

Query, 501 a.a., OmpA-like porin from Agrobacterium fabrum C58

Subject, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 360 VRINNSGLFTTGSADVSPQFRDLIQRIGGALAAEKFRAVVI-GYTDTVPIKTVEFPSNWH 418
           +++NN+  F TGSA VS   +  +  +   LA E    +V+ G+TD    + +    N  
Sbjct: 94  IKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKL----NDK 149

Query: 419 LSEARAKAVGDILSQF-TGPDAILTEGRADSDPIADNKTEEGRQINRRTEI 468
           L+E RA AV   L Q     +AI T G  ++ P   N T+ GR  NRR EI
Sbjct: 150 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 200