Pairwise Alignments

Query, 996 a.a., sarcosine oxidase alpha subunit from Agrobacterium fabrum C58

Subject, 980 a.a., sarcosine oxidase, alpha subunit family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  660 bits (1704), Expect = 0.0
 Identities = 398/1001 (39%), Positives = 552/1001 (55%), Gaps = 33/1001 (3%)

Query: 5   RVSGRGRVDAARSVSFTFDGKSYRGVKGDTVASALLANGVHLMGRSFKYHRPRGPVAAGS 64
           R+ G G +D    + F FD +   G  GDT+ASAL+ANGV L+ RSFKYHRPRG  +AGS
Sbjct: 2   RLDGAGLIDRDTPLRFQFDDRWMGGFAGDTLASALMANGVKLVARSFKYHRPRGIWSAGS 61

Query: 65  EEPNALIGTRRGAGQFEPNTRATVQEIWNGLETTSQNKFPSLNFDIGAVNDMAYMLFSAG 124
           EEPNAL+   + A Q  PN RAT  E++ GL  TSQN++PSL  D+ ++ND+A     AG
Sbjct: 62  EEPNALVQVGKFARQV-PNVRATQAELFEGLYATSQNRWPSLTLDLLSLNDLAAPFLGAG 120

Query: 125 FYYKTFMWPKSFWNKVYEPFIRAAAGLGVSPTEEDPDTYASRNLHCDVLIVGGGPAGLAA 184
           FYYKTFMWP+SFW K+YEP IR AAGLG    + + + Y     HCD+L++G GPAGL A
Sbjct: 121 FYYKTFMWPRSFWEKLYEPAIRRAAGLGALSGQTNTEPYEKAYAHCDLLVIGAGPAGLMA 180

Query: 185 ARAAAVDGLKVVLVDENAEAGGTLLSEPQAKIDGKPAWTWLADELKTLREQG-VKVMTRT 243
           A  AA  G  V+L +E    GG LLSE Q ++DG     W++  +  L   G V+VMTRT
Sbjct: 181 ALTAARAGADVILAEEGDRCGGRLLSE-QEEVDGASGQDWVSRIVAELVTSGRVRVMTRT 239

Query: 244 TAIAYYHQNMIGLCEKLTDHLETVPKDTPRERLWRVRARQVVLAQGALEKPLVFHGNDRP 303
           T    Y   + G  E++  HL       PRE  WR+ AR+ +L  GA E+P+ F  NDRP
Sbjct: 240 TVTGAYDGGIYGALERVGLHLADPAPALPRECFWRISARRAILCAGASERPIAFPMNDRP 299

Query: 304 GVMLAGAAQTYLNRYGVKVGNRPVVVTSHDSAWYAAFDLHGAGARVQAIIDTRAKVREEL 363
           G++ A A +TY NRY    G R  +  ++D A+  A DL  +G  V A++DTRA+  E  
Sbjct: 300 GILSAAALRTYANRYRTVPGPRVALFCNNDDAYRTARDLVASGVEVAAVVDTRAETPEG- 358

Query: 364 VNEARALGIPVKLSHTVTATSGRLRVKSVRVNSVNGSTVAAGQEMACDAVLMSGGWTPSL 423
                    PV     V  T GR  ++ + V+  +G      +++  DA+ +SGGW P+L
Sbjct: 359 -------DYPVFREARVVDTRGRHGLRRITVDGPDGR-----RQIEVDALGVSGGWNPNL 406

Query: 424 HLFSHTQGKLAWDDERATFLP---ALTNEDCLIAGAGRGLWGIEAALKDGAERGREVVAA 480
           HL  H  G+  W+     F+P   A+   D  +AGA  G++    ALK G  R R+ + +
Sbjct: 407 HLTCHMYGRPTWNPALHAFVPTPGAVPGLD--VAGAAAGVFSTHGALKSGVFRARKALES 464

Query: 481 LGKTANVSSHAVEYDRTGSGVSHTELLSDRDASKAKAFVDYQNDVTAKDLRLAVREGMRS 540
           L + A  S    + D     +S    +     ++ +A++D+QNDVT KD+R A  E M S
Sbjct: 465 L-ELAPSSMPIPQADDAPYVLSPIYAVDGAKGARGRAWLDFQNDVTVKDVRQAASENMTS 523

Query: 541 IEHVKRYTTNGMATDQGKMSNINGLNIAAEALGKPQPQVGLTTFRPPYTPTTFGAFAGYH 600
           +EH+KRYTT GMATDQG++SN+  L++ A+A G+  P+ G TTFRPPYTP +  A     
Sbjct: 524 VEHMKRYTTQGMATDQGRVSNVLALSVLADATGRGIPETGTTTFRPPYTPVSLAALGAGA 583

Query: 601 RGEHFEVTRKTQIDSWAKEHGAVYEPVGQWRRAWYFPKPGE-DMDAAVGRECRAVRQSVG 659
           +G+ F   R T   + +   GA     G W R  YFP+ GE     A  RE   VR +VG
Sbjct: 584 QGKGFAPERLTTSHAGSLARGAPMVEAGLWYRPSYFPRDGETTWREACDREVGHVRSAVG 643

Query: 660 IFDASTLGKIEVVGPDAVEFMNRMYTNPWTKLAPGRCRYGLLLGDDGFIRDDGVIGRMTE 719
           + D STLGKIE+ GPDA  F++ +Y N ++ L PGR RYG++L +DG + DDG    +  
Sbjct: 644 VCDVSTLGKIELQGPDAGAFLDLVYANTFSTLKPGRVRYGVMLREDGHVMDDGTTACLGP 703

Query: 720 DRFHVTTTTGGAARVLNMMEDYLQTEWPDLNVWLTSTTEQWSTIALNGPNAAKLLAPLVE 779
             + +TTTT  A +V+  +E   Q   P + V  TS TE W+  A+ GP A  LL  L++
Sbjct: 704 GHYVMTTTTVAAHKVMQHLEFVQQCLVPTMRVRFTSVTENWAQFAVAGPQARALLNDLLD 763

Query: 780 GVELTEEAFPHMSCLECTVAGMPARLFRVSFTGEIGFEVNVPAPLGRKLWEILWEAGQQY 839
              +    FP M+C    + G+  RLFR+SF+GE  +EV +PA  G  L+E L    +  
Sbjct: 764 -APVRNANFPFMACGAVRLGGVGGRLFRISFSGEHAYEVAIPARYGAALFEQLVARAEAM 822

Query: 840 CITPYGTETMHVLRAEKGYIIVGQDTDGTVTPYDAAMDWAVGKNKPDFVGKRGLARPDLV 899
               YG E ++VLR EKG+ +   +  G VT  D  +   V   K D +GK    RP L 
Sbjct: 823 GGGAYGMEALNVLRIEKGF-VTHAEIHGRVTADDVGLGRMVSAKK-DCIGKTASQRPGLT 880

Query: 900 AKGRRHLVGLLTED-RSKLEEGAQIVFDAKQPIPMKMVGHVTSSYHSDAAGQPIALALVE 958
              R  LVGL   D R+ L  GA +     + + +   G+VTS   S     PI L  + 
Sbjct: 881 DPDREQLVGLRPCDGRTALLAGAHLFEPGAEAVRVTDQGYVTSVCFSPTLQTPIGLGFLR 940

Query: 959 GGHERMGETVYIPMLDR----TIAAKITGMVFVDPENTRLK 995
            G  R G+ V   M+D     T   ++T  VF DP+  R +
Sbjct: 941 RGRARHGQRVM--MIDHLRGVTTECEVTDPVFFDPDGGRAR 979