Pairwise Alignments

Query, 417 a.a., sarcosine oxidase beta subunit from Agrobacterium fabrum C58

Subject, 416 a.a., sarcosine oxidase, beta subunit family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  395 bits (1014), Expect = e-114
 Identities = 200/412 (48%), Positives = 262/412 (63%), Gaps = 2/412 (0%)

Query: 3   RFNAFNLLRNALTGNKNWDEQWPDSQPKAEYDVVIVGAGGHGLGAAYYLASQHGITNVAV 62
           R++A  LL+  L+GNK W   W    PK  YD +I+G GGHGL  AYYLA  HG+TNVAV
Sbjct: 2   RYSALELLKQGLSGNKGWPLLWRSPAPKPAYDALIIGGGGHGLATAYYLARNHGMTNVAV 61

Query: 63  IDKGWLGGGNTGRNTTIIRSNYLYDESARLYDHAVDLWENLSQELNYNVMYSRRGVLMLA 122
           ++KG+LG GN GRNTTI+R+NYL   ++  Y H++ LWE +  +LN+N M+S+RG++ L 
Sbjct: 62  LEKGYLGSGNIGRNTTIVRANYLLAGNSEFYSHSLKLWEGMETDLNFNAMHSQRGIINLF 121

Query: 123 HNVHDVQSFKRHIHSNRLNGVDNRWLSAEECKEYCPPLSLAPNARYPVMGGALQERAGTA 182
           H+     +F R  ++    G D   L  E  +   P L      RYP+ GG   +R GTA
Sbjct: 122 HSDGQRDAFARRGNAMINQGDDAILLDREGVRREVPYLDF-DQTRYPIYGGLWHKRGGTA 180

Query: 183 RHDAVAWGYARGAAARGVDIIQNCPVTAIRRNADGSVAGVETARGFIKAKKVAVSAAGHT 242
           RHDAVAWGYARGA  RGVD+IQNC VT      +GSV GV+T RG I+A KV +  AG +
Sbjct: 181 RHDAVAWGYARGADQRGVDLIQNCEVTGFLIE-NGSVQGVQTTRGEIRAPKVGMVVAGRS 239

Query: 243 SVVMDTAGVRLPLESYPLQALVSEPIKPIFPCVVMSNAVHAYISQSDKGELVIGSGTDQY 302
             V + AG RLP+ES+ LQA V+E +KP    V+     H YISQSDKG LV G   D Y
Sbjct: 240 GQVAEMAGFRLPIESHILQAFVTEGLKPCIDQVITYGMGHFYISQSDKGGLVFGGDLDFY 299

Query: 303 TSYSQRGGLPLIEHTIAAIVEIFPIFNRMRMLRKWGGIVDVTPDRSAILGKTPVEGLYVN 362
            SY+QRG LP+ EH + A + + P+  + +MLR WGGI+D+TPD S I+  +PV+GLYVN
Sbjct: 300 ASYAQRGNLPMAEHVVEAGMTLMPMIGKAKMLRSWGGIMDMTPDGSPIIDHSPVQGLYVN 359

Query: 363 CGWGTGGFKATPGAAHTFAWTIAKNEPHPINAPFTLERFRSGRLIDEAAAAA 414
            GW  GGFKA P +    A  +A +  H I   + L+RFR+G LIDE A  +
Sbjct: 360 GGWCYGGFKAVPASGWCMAHLMATDTVHEIARRYRLDRFRTGHLIDEEATGS 411