Pairwise Alignments

Query, 496 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 380 a.a., Small-conductance mechanosensitive channel from Pseudomonas stutzeri RCH2

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 68/305 (22%), Positives = 132/305 (43%), Gaps = 29/305 (9%)

Query: 33  SQRSNLRLVVQIAFFGAMTSVLVLGKIPLGPPKDLWTGD-EHAVFIVFA-QLLWWLHLSW 90
           S+ SNL ++       A + ++ L  + L P    W     H  FI  A Q   W+    
Sbjct: 60  SRTSNLLIL-------AFSLLIALKTVELSPR---WESTMSHGWFIALAFQFALWMDTG- 108

Query: 91  AVIGFVRIYLVLEGRPREARL-LQDIVVG-----VVYVCVTLSALAFVFGVPVGTLVATS 144
                VR+++    R  +AR  +   ++G     VV+  + LS LA + GV +  +VA+ 
Sbjct: 109 -----VRLWMESLTRDGKARNPVTTTIIGIMIRIVVWTMMLLSILANL-GVDITAMVASL 162

Query: 145 GVIAIALGLALQNTLGDVFSGVALNLGHTYALGDWILLEDGTEGRVIASTWRSTQILTGA 204
           GV  IA+ LA+Q  L D+F+ +++ +   + +GD+++  +   G +     ++T+I   +
Sbjct: 163 GVGGIAIALAVQTLLSDIFASLSIGVDKPFEIGDFVVFGE-VAGNIEHIGLKTTRIRALS 221

Query: 205 NNIVVLPNSVLAKLKLTNVSRPDETHLL-KMTVRL-VPTHAPSMIEEAMTTVLAGCNSIM 262
              VV+ N+ L +  + N  R +   ++ K  +    PT     +   +  ++ G     
Sbjct: 222 GEQVVIANADLLRQIVHNYKRMNTRRIVFKFGITYNTPTDKVKEVAALVKRIIDGIEVAK 281

Query: 263 REPPPLVSMSGLDATALEIHLFFRVSNPMLRIKAQNEVIDRFYRHCRSIGLQLAMPPSAI 322
            +    +       T  E+    +VS+    +  Q E+        R +G+Q A P  ++
Sbjct: 282 FDRAHFLGFDDSQLT-FEVVYIMQVSDYNRYMDTQQEINLALLEGMREMGVQFAFPTRSV 340

Query: 323 AIMNG 327
             + G
Sbjct: 341 EFIGG 345