Pairwise Alignments

Query, 496 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 48/206 (23%), Positives = 110/206 (53%), Gaps = 20/206 (9%)

Query: 92  VIGFVRIYLV---LEGRPREAR---LLQDIVV----GVVYVCVTLSALAFVFGVPVGTLV 141
           V+G+  + +V   LE   ++++   L+ + V+     ++YV V L A+  VFGV  G ++
Sbjct: 25  VLGYFAVKIVSSILENGAKKSKIPELVSEFVIKLFSAILYVFVILLAVG-VFGVETGPII 83

Query: 142 -ATSGVIAIALGLALQNTLGDVFSGVALNLGHTYALGDWILLEDGTEGRVIASTWRSTQI 200
              S  + + LG  LQ+TL ++ SG+ + +       + + +  G  G+++     +T++
Sbjct: 84  LGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQI-GGITGKIVEVGIMATKL 142

Query: 201 LTGANNIVVLPNSVLAKLKLTNVSRPDETHLLKMTVRLVPTHAPSMIEEAMTTVLAGCN- 259
           LT  N ++ +PN ++    +TN +R D   L ++ V +  ++  + ++ A++  L   + 
Sbjct: 143 LTPDNVVITIPNKLVWGSPITNYTRMD---LRRVDVAVGVSYGEN-LDNALSKALELISE 198

Query: 260 --SIMREPPPLVSMSGLDATALEIHL 283
              ++++P P V ++GL  +++++ L
Sbjct: 199 HPKVLKDPAPAVVVTGLGESSVDLQL 224