Pairwise Alignments

Query, 252 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 320 a.a., chaperon-like protein for quinone binding in photosystem II from Synechococcus elongatus PCC 7942

 Score = 70.5 bits (171), Expect = 4e-17
 Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 20/207 (9%)

Query: 1   MKIVVIGGTGLIGSKTVERLRKKGHEV--LAASPNSG-------VNTVTG-----EGLAG 46
           M ++V+G TG +G +   R   +GH V  L  SP  G        + V G     E L  
Sbjct: 1   MDVLVVGATGTLGRQIARRALDEGHRVRCLVRSPKRGNFLREWGCDLVRGDLTQPESLTF 60

Query: 47  ALVGAEVVIDLANSPSFEEKAAMDFFEAAGRNLFAAEKTAGVRHHVALSVVGTDRMQEMG 106
           AL G E VID A + S +  +  D       NL  A   AGV+  V  S++  ++ +++ 
Sbjct: 61  ALEGIEAVIDAATTRSTDSLSCYDVDWQGKVNLIKAATEAGVQRFVFCSIIDAEKHRDVP 120

Query: 107 YFRAKLRQEEHIRKSGVPYTILHATQFFE-FVGAIAQSATEGTTVRVPTGAFQPIAADNV 165
               K   EE +R+SG+ YTIL    F +  +   A    EG T  + T    PIA  + 
Sbjct: 121 LMDIKYCTEEFLRQSGLNYTILRLAGFMQGLIAEFAIPVLEGRTAFI-TQDSDPIAYLST 179

Query: 166 AD--AMADAALAAPV--NGVIEIAGPE 188
            D    A AAL  P      + + GP+
Sbjct: 180 LDIARFAVAALTTPATEKQTLPVVGPK 206