Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 300 a.a., Transcriptional regulator of various polyols utilization, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (279), Expect = 1e-29
 Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 16/285 (5%)

Query: 6   EAVSVPADRSWLLFDRRLPEFPFNWHYHPEFELTLTLNSAGMRFVGDSVENYGDGDLVLL 65
           E +    + S+  ++   P     W++HPEFE+ L    +G    GD +  +G G + ++
Sbjct: 17  EVILPEPEHSFRWYEHDYPYPMARWNHHPEFEIHLIRQGSGKLLAGDYIGPFGPGHVAMI 76

Query: 66  GPNLPHAWQSHGLINAPGVH---RAVVCWFTRDWIEGLIALTPELSAITPLLVESGHGIC 122
           GP+LPH W       A G H   R VV  F    +  L    PEL  +  L   +  G+ 
Sbjct: 77  GPDLPHDWMGD---LASGEHLPGRDVVLQFDGATLLTLRRTLPELGDLQGLFERARRGLA 133

Query: 123 FGEDALAKVGERLATLHKIAPEQQILTLLGVLVDLARVSDRRPLSAGEVTAST--AP--- 177
           FG +   +       L  I P Q  L  L + ++L    ++ P       AS   AP   
Sbjct: 134 FGGNTARQAAH---LLEAIGPAQG-LARLALFLELLHTLNQAPGDEALSLASPCYAPTLD 189

Query: 178 -RDRARMQRVLNHIHAHYIGTISIKPLSEIAHLSDSQLQRLFKRSTRMTISQYIGQLRVG 236
            R   R+ +   ++ A   G + +  ++    +S+    R FKR T       + +LRV 
Sbjct: 190 ARSSERIHKAFEYLQAELTGDLRLSVIARQLDMSEPGFSRFFKRITGHGFIDLMRKLRVQ 249

Query: 237 GACRLLAQTDLSLARIAEETGFSDAAHFSRQFRAARGMTPGDYRR 281
            ACRLL Q+++ +  I  E G+++ ++F+R FR     TP +YRR
Sbjct: 250 RACRLLLQSEMPVTDICFEVGYNNLSNFNRHFRIEMNQTPSEYRR 294