Pairwise Alignments

Query, 282 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

Subject, 288 a.a., shikimate 5-dehydrogenase from Synechococcus elongatus PCC 7942

 Score =  139 bits (350), Expect = 7e-38
 Identities = 90/254 (35%), Positives = 133/254 (52%), Gaps = 5/254 (1%)

Query: 28  AAYQHHGLNWRYINLEVSPENLKDAVAGARAMGWAGFNCSIPHKVAVIQHLDGLGESAEI 87
           AA    GL++ Y+   V   +L  A+AG  A+G  GFN +IPHK AV+  L  + E A+ 
Sbjct: 29  AAIAELGLDYCYVPFPVKGADLATALAGLAAIGVQGFNVTIPHKQAVMPLLSQVSELAQS 88

Query: 88  IGAVNTIVRRGDRLIGENTDGKGFVKALRDV-IDPKDKKVVLFGAGGAARAVCVEVALAG 146
           +G+VNT+ +     +G NTD  GF+  L+ +  D    +VVL G GGAARAV       G
Sbjct: 89  VGSVNTVWQTEQGWVGTNTDVLGFLAPLQTLRSDWSGCRVVLLGCGGAARAVVAGCLQLG 148

Query: 147 AAHITVVNRNRERGETVARLIDEKTPATATFAAWEDAFAIPEETDIVIHATSVGLYPDID 206
            + I  V R+ ++G+   +   ++   + T   W D   +    D+V++ T +G+ P I+
Sbjct: 149 CSAIATVVRDAQKGDAFQQSWGDRAD-SLTIHDWSDIPDVLSTADLVVNTTPLGMDPHIE 207

Query: 207 GLP--DIDLKTLRPSMVVADGIHNPPRTRLIRAAEAAGSKTADGLGMLVNQGVIGIKYWT 264
             P  +   + LRP  +  D I+ P  TR ++ A A G    DGL MLV QG  G+K WT
Sbjct: 208 RSPLDNSAAQQLRPETIAYDLIYTPSPTRFLQQAIAQGCHAIDGLEMLVQQGAAGLKIWT 267

Query: 265 GVD-VDAYVMRQAL 277
           G + V    MR  L
Sbjct: 268 GAEAVPVDTMRSVL 281