Pairwise Alignments

Query, 282 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

Subject, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

 Score =  178 bits (451), Expect = 1e-49
 Identities = 103/272 (37%), Positives = 158/272 (58%), Gaps = 4/272 (1%)

Query: 8   EITGSFAMPAGENPTVAMIEAAYQHHGLNWRYINLEVSPENLKDAVAGARAMGWAGFNCS 67
           ++ G    P   + +  M  AA +   +N+RY   +VS ENLKD VAGA+A  + GFN +
Sbjct: 7   KLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNIT 66

Query: 68  IPHKVAVIQHLDGLGESAEIIGAVNTIVRRGDRLIGENTDGKGFVKALRDVIDPK-DKKV 126
           IPHK+ ++++LD +   AE IGAVNT+     + IG NTDG G  KAL +      +K +
Sbjct: 67  IPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILINKNI 126

Query: 127 VLFGAGGAARAVCVEVALAGAAHITVVNRNRERGETVARLIDEKTPATATFAAWEDAFAI 186
           ++ G+GGA+RAV  E  LA   ++T+VNRN E+ E +++ I  K               I
Sbjct: 127 LIIGSGGASRAVSFE--LAKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINI 184

Query: 187 PEETDIVIHATSVGLYPDIDGLPDIDLKTLRPSMVVADGIHNPPRTRLIRAAEAAGSKTA 246
            E  DI+I+ T VG+YP  +  P I L  ++   VV D I+NP     ++ A+  G+KT 
Sbjct: 185 -ENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTI 243

Query: 247 DGLGMLVNQGVIGIKYWTGVDVDAYVMRQALV 278
           +G+GMLV QG +  + WTG+  D +VM+++++
Sbjct: 244 NGIGMLVYQGAVSFEIWTGIKPDIFVMKKSII 275