Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  171 bits (433), Expect = 2e-47
 Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 8/289 (2%)

Query: 11  VEAFIIVAEKGSMTEAAVALATTASVLSRAITRLETRLGAQLMRRTTRRLNLTDEGRAYL 70
           +  F+ VAE  + T AA  L  + + +SR I  LE RLG +L  RTTR+++LT+EG  Y 
Sbjct: 7   ISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYY 66

Query: 71  EQARAAFSMIDDAERAIQGPTGASLTGHVRISVPTTYGHHRLPAMLERFMQAYPEVQIEL 130
              R   + +++AERAI      S  G V+++ P  YG   +  +L  FM  YP V+  +
Sbjct: 67  RHCRQLQTGLEEAERAITDLKD-SPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNV 125

Query: 131 SITNRNVDLVAEGYDLAIRLGPLPDSGLVARKLEDASLRLVAAPHYLERAGMPQDVEDLA 190
            +TNR +DL+  GYDLAIRLG L DS L+A+ L   +  + A+P Y+E+ G P  + +L 
Sbjct: 126 DLTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELN 185

Query: 191 EHQCLPFVMPSTGRCAPWLFHVDGRDLDWTPPGRIQVFDDVLGVVSLAESGLGICQIYDF 250
           +H CL       G    W F   GR+ ++   G++ + +    +   A  G+GI Q+ D+
Sbjct: 186 QHNCL------IGNHNYWRFIEHGRERNFKVRGKL-ICNSGYALRDAALKGIGIVQLPDY 238

Query: 251 IIRDRVKEGRLVEVLDHAQGRFRPFSLIFAPHRRLSAATRTLIDFLVEK 299
            I + +  GRL+  LD  +        ++  +R LSA  R L+D+L EK
Sbjct: 239 YIEEDIHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEK 287