Pairwise Alignments

Query, 254 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 251 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  281 bits (720), Expect = 7e-81
 Identities = 143/242 (59%), Positives = 180/242 (74%), Gaps = 2/242 (0%)

Query: 13  IRISNVCKSYGDYQVLKNIDAEVARGEVVVICGPSGSGKSTLIRTVNRLEEINSGSITLD 72
           I+I ++ K YG++ VLKNI+  V +GE +VICGPSGSGKST+IR +NRLEE   G I + 
Sbjct: 11  IQIKDMNKWYGEFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQKGQIIVA 70

Query: 73  GRDIHAATRTRELNLLRSRIGFVFQSFNLFPHLSVVENVTISPIRVKGVSPDIAQQKALA 132
           G ++      + + L+R  +G  FQ FNLFPHL+V+EN T++PI VK +  D A++ A+ 
Sbjct: 71  GNEL--TEDLKNIELVRREVGMCFQHFNLFPHLTVLENCTLAPIWVKKMPKDKAEEIAMK 128

Query: 133 LLERVGLAEKAGAYPGQLSGGQQQRVAIARALAMEPPVMLFDEPTSALDPEMVGEVLAVM 192
            L RV + E+A  YPGQLSGGQQQRVAIAR+L M P +MLFDEPTSALDPEMV EVL VM
Sbjct: 129 YLTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTSALDPEMVREVLDVM 188

Query: 193 KGLAAEGMTMLCVTHEMGFAREVADRIWFIDAGEILERATPEEFFKTPRHPRAQRFLADL 252
             LA EGMTMLCVTHEMGFA+EVADR+ F+DAGEI+E   P+EFF+ P+  R Q FLA +
Sbjct: 189 VELAEEGMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKEFFENPQSDRTQNFLAQI 248

Query: 253 RH 254
            H
Sbjct: 249 LH 250