Pairwise Alignments

Query, 235 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (271), Expect = 7e-29
 Identities = 78/231 (33%), Positives = 124/231 (53%), Gaps = 13/231 (5%)

Query: 3   GFDLSAILSNQEYIAMLLHGIEMTFIIFIGSWSL--AMSLALILLCIRFSPSRFGDRLVA 60
           GFD   +L   E + +LL  +  T  + + SW L  A+ LAL L  IR       D L  
Sbjct: 2   GFDFHYML---ELLPILLKYLGTT--LEMASWGLVFALILALFLANIRVFKVPVLDPLSQ 56

Query: 61  AYVSYHRNVPTLVQLMLWYFGIFTLLPSGLTGWLTEHNAEAIFAVVGLGLCQAAYFSEDL 120
            Y+S+ R  P LVQL L Y+G+  + P  L   L   +A    AV+GL L  AAY +E +
Sbjct: 57  LYISFFRGTPLLVQLFLLYYGLPQVFP--LLVGLDAFSA----AVIGLTLHFAAYMAESI 110

Query: 121 RSGLRSVSPGQMEAAKALGHSYLSAMRFIIMPQGVRNALPPLINHSVSLFKNSSLALVIG 180
           R+ +  +   QMEA+ ++G +   AMR II+PQ  R ALP L+N+ + + K++SLA  +G
Sbjct: 111 RAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLG 170

Query: 181 ASELTHAVKEIENLSFQTFEIYLVGTVLYLFFSLLIMGAGAYLSMRLDPAW 231
            +E+    +   + SF+ FE +L   ++Y    L++    ++   +L+ A+
Sbjct: 171 VAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLNKAY 221