Pairwise Alignments

Query, 235 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  102 bits (255), Expect = 6e-27
 Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 11/212 (5%)

Query: 9   ILSNQEYIAMLLHGIEMTFIIFIGSWSLAMSLALILLCIRFSPSRFGDRLVAAYVSYHRN 68
           ++++  + + +L G+ +T  + + +  + + L  I   +  + +     +  AY+ + R 
Sbjct: 56  VVADYLFDSRILWGLSLTVWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANAYIWFFRG 115

Query: 69  VPTLVQLMLWYFGIFTLLPSGLTG------WLTEHNAEAIF----AVVGLGLCQAAYFSE 118
            P LVQL+ WY  +  L P    G      W++      I     AV+GLGL + AY SE
Sbjct: 116 TPVLVQLIFWY-NLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSE 174

Query: 119 DLRSGLRSVSPGQMEAAKALGHSYLSAMRFIIMPQGVRNALPPLINHSVSLFKNSSLALV 178
            +RSGL SV PGQ +AAK+LG +    +  I++PQ +   +PP  N ++ + K SSL  V
Sbjct: 175 IIRSGLMSVDPGQRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGMLKTSSLVSV 234

Query: 179 IGASELTHAVKEIENLSFQTFEIYLVGTVLYL 210
           I  ++L ++ + I + +FQT  + +V  + YL
Sbjct: 235 ISLADLLYSAQTIYSRNFQTIPLLIVACIWYL 266



 Score = 24.6 bits (52), Expect = 0.002
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 56  DRLVAAYVSYHRN---VPTLVQLMLWYFGIFTLL 86
           D L +A   Y RN   +P L+   +WY    T+L
Sbjct: 239 DLLYSAQTIYSRNFQTIPLLIVACIWYLAATTIL 272