Pairwise Alignments

Query, 255 a.a., LamB/YcsF family protein from Agrobacterium fabrum C58

Subject, 246 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  154 bits (388), Expect = 2e-42
 Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 1/240 (0%)

Query: 3   IDLNSDMGEGFGPYRLCDDEAMMKIVSSANIACGFHGGDPDTMARMVRLAKANGVGIGAH 62
           I LN DMGE FG + +  DE +M  +  ANIACGFH  DP  M+R + LA  + V IGAH
Sbjct: 6   IQLNCDMGESFGVWTMGADEEVMPWIDMANIACGFHASDPHVMSRTIDLALEHEVMIGAH 65

Query: 63  PGLPDRAGFGRREIPFQPDELRQQMLYQLGALMAIAGAEGMKVGHFSFHAAMGNMVNRDP 122
           P  PD  GFGRR +     E+ + +LYQ+GAL A+  ++  ++ +   H A+ N +  DP
Sbjct: 66  PSYPDLQGFGRRSLAMNEQEVSEIILYQVGALKALCESKNGQLSYVKPHGALYNDMMSDP 125

Query: 123 VLADLMMNAIATVD-PRLVVFVTPESEIERAAKRAGLKTLALFLADRAYDAEGRLVARGL 181
            +   +++A++  + P +V+      +    A R  +  L    ADR Y A G+L  R  
Sbjct: 126 SIFRAVVDAVSCFNLPLMVLASANNQDYLDIADRFDVPLLFEAFADRTYLANGKLTPRSQ 185

Query: 182 PGALVKDETSVRARVRRFLTHGQVEAIDGTIIAMPAHSILVHSDTPGSLELARIIRSEIE 241
           P A++  E ++  +VR+   +G+V + DG +I + A ++ VH D P ++ L   IR+ ++
Sbjct: 186 PNAVLSSEEAILNQVRQIARYGKVTSSDGFVIPIEADTLCVHGDNPNAVSLIARIRAALD 245