Pairwise Alignments

Query, 209 a.a., RhtB family transporter from Agrobacterium fabrum C58

Subject, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

 Score = 84.0 bits (206), Expect = 2e-21
 Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 11/211 (5%)

Query: 4   SQLAIVYGTYLIATASPGPSNMAIMATAMRDGRLPALALAAGVITGSLFWAILTATGLSA 63
           S LA + G + IA  SPGP    ++  A + GR   + +A G+  G L   IL+ +G+S 
Sbjct: 5   SILATLAGVHFIALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLSGISY 64

Query: 64  VLTAYAQALFVIKIAGGAYLPYLAFRAGRS--ALKPVSDLAGMTVERAVPRYRSLYRQGL 121
           ++        ++++AGG+YL YL   A +S  A K  S          +   R  + +G+
Sbjct: 65  LVKQQPMLFNLLQLAGGSYLLYLGAGALQSVMAQKNASTPTHSPAPSILGNRRQAFTKGM 124

Query: 122 FMHIGNPKAILSWIAIMSLGFRADAPAGM-VPAIIGGCAI---LGVTVFGGYALLFSTAS 177
             ++ NPKA++ +++++S    +  PA M V   +   AI   L +T F   A L +T++
Sbjct: 125 MTNLLNPKALVFFVSLLS----SLIPASMSVSGKVSAAAILVGLSLTWFSCLAWLLTTSA 180

Query: 178 MIALYTRLRRWIESVLSAVFAVAGLKLLVWQ 208
           M     R+ R ++S+ +AVF +AG  +++WQ
Sbjct: 181 MQQRMQRITRSVDSICAAVFILAG-GVILWQ 210