Pairwise Alignments

Query, 365 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (463), Expect = 1e-50
 Identities = 133/380 (35%), Positives = 189/380 (49%), Gaps = 39/380 (10%)

Query: 10  LKIPCVLMRGGTSRGPFFLASDLPRDQ----AERDAALLSIMGSGHPL--QIDGIGGGNP 63
           ++IP   MRGGTS+G FF  +DLP +     A RDA LL ++GS  P   QIDG+GG   
Sbjct: 8   IRIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGGATS 67

Query: 64  VTSKVAIIGPSTVKGADIDYLFAQVRTDRQYVDYSPNCGNMLAAVGPFAIEAGLVEA--- 120
            TSK  I+  S+    D+DYLF QV  D+ +VD+S NCGN+ AAVGPFAI AGL+ A   
Sbjct: 68  STSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPAECI 127

Query: 121 -HGNDTIVRIHNVNTSKLIEAKVPTRGREVIYLGDASIDGVPGLAAPIALTFMDAAGAKT 179
            H     V++  VN SK I   VP     V   G+  +DGV   AA + + F+D A   +
Sbjct: 128 PHNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDPAD-DS 186

Query: 180 GRLLPTGKAVD-----MIDGLEVTAIDCAIPMVLMRAADLGLTGYEDPQALTANSDLIER 234
           G + PTG  +D      I  L  T I+  IP + + A  LG  G E  +A+ ++   + +
Sbjct: 187 GAMFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSDPQALAK 246

Query: 235 MTRIRIQAGKLMGMGDVTDMV-----IPKPVLVAPARR------------GGTLSVRYFM 277
              +R      MG+ +  +        PK   V+ A+                L VR   
Sbjct: 247 FETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDLLVRALS 306

Query: 278 PNECHPALATTGAVGIATAAVTEGSVAYDLAGRLSVPTQISIEHPAGRLDVQLEMREG-- 335
             + H A+  T AV IA+AA   G++  +LA      T ++  HP+G L V  + ++G  
Sbjct: 307 MGKLHHAMMGTAAVAIASAAAVPGTLV-NLAAGGGERTSVTFGHPSGTLKVGAKAKQGKQ 365

Query: 336 ---AITAGLVRTARRLFEGF 352
                 A + R+AR L EG+
Sbjct: 366 GWQIERAIMSRSARILMEGW 385