Pairwise Alignments

Query, 273 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  207 bits (526), Expect = 2e-58
 Identities = 107/238 (44%), Positives = 153/238 (64%), Gaps = 5/238 (2%)

Query: 33  VAVQNVNLRVGDGEFLSIVGPTGCGKSTILNAIAGLLKPAQGKVSIDGTAVQGVQNTIGY 92
           VAV NV+L V   EF+SIVGP+GCGKSTIL  IAGL  P+ G + +D   V G     G 
Sbjct: 21  VAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSSGGIYLDEKEVLGPDADRGM 80

Query: 93  LFQQDALLPWKTAFQNVELGLMFRGVAEDERRAKVTAWLEKVGLKGFGDRFPHQLSGGQR 152
           +FQQ  LLPWKT  QNV  GL  + + +++R      +++ VGL+ F D +P++LSGG +
Sbjct: 81  VFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKKFIKMVGLEEFCDSYPYELSGGMQ 140

Query: 153 KRVQMAQALITEPKVILMDEPFSALDIHTRHLMQNELLRLWQEDRRAVVMITHDLEEAIA 212
           +RV +A+ L   PK++LMDEPF ALD  TR ++Q+ LL++WQ +++ VV +TH ++EA+ 
Sbjct: 141 QRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHLLKIWQTEKKTVVFVTHSVDEAVY 200

Query: 213 LGDRVVVLAAGPKSRVIESFPVDLERPRNVAEIKLDPKFMTLYRDIWASLRGEVEKSY 270
           L DRVVV+ A P  ++     +DL+RPR     +  P+F    + I   L+ EV KSY
Sbjct: 201 LSDRVVVMTARP-GKIKSIIDIDLDRPRK----RTSPEFTKYKKMIIDELKSEVLKSY 253