Pairwise Alignments

Query, 531 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  370 bits (951), Expect = e-107
 Identities = 209/530 (39%), Positives = 308/530 (58%), Gaps = 26/530 (4%)

Query: 15  SLLLGASSALAETV-------------------LHRGNSGEPQTLDQAQTSINIEAFILK 55
           +LLLGA  A+A T                    L RGN  E  +LD  +T    E+ +++
Sbjct: 9   ALLLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIR 68

Query: 56  DLFEGLTIYDAAGKIVPGTAESWTLSDDGTVYTFKLRADAKWSDGTPVTAGDFVFSYQRV 115
           DL EGL   DA G +VPG AESW  +D+ T +TF +R DAKWS+G PVTA DFV+S+QR 
Sbjct: 69  DLLEGLVNQDANGNVVPGVAESWETTDNKT-FTFHIRKDAKWSNGDPVTAHDFVYSFQRA 127

Query: 116 EDPKTAAKYANILY--PIKNAEKINKGETPVDQLGVKAVDDKTLEITLERSTPFFLELLA 173
            DP TA+ Y+  +    +KNA++I  GE     LG KAVDD TL   LE + P+F+ ++ 
Sbjct: 128 VDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMG 187

Query: 174 HQTALPISKASYEKNGTNFVKPGVMVSNGAYKLEAHVPNDSLTVVKNTDFWDASNTKIDK 233
           H T  PI KA+ EK G  + KP   V NGAY L+  V N+ L + +N  +WD  NT ++K
Sbjct: 188 HTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNK 247

Query: 234 VIFYPIDDQAASVRRFEAKEMDLAYNFSADQIDRLRKSYGEQVHVSPTLATYYYTFDTRE 293
           V + PI++Q A + RF + E+ +      +   RL+K + E V V   L TYYY F+ ++
Sbjct: 248 VTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKK 307

Query: 294 APYDDVRVRQALSMAVDRDFLAKEIYSGSQVPAYSMVPPGMDSYGEPAKADFATLSQLDR 353
            P+DDVRVR+ALS A+DRD ++  I    Q PAY + P     +  P    +  ++Q +R
Sbjct: 308 PPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGF-SPEMPAYGKMTQKER 366

Query: 354 EDEALKLMKDAGYGEGGKPLSIEIRYNTNPNHERVATAIADMWKNTFGAKVSLVNLDVAS 413
             EA KL+++AGY +   PL   + YNT+ NH+++ATAI  MWK + G  ++L N +  +
Sbjct: 367 IAEAKKLLEEAGYNK-SNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKT 425

Query: 414 HYGYLQEGGKFNVARAGWVADYADAENFLALSVSSNKTFNYSKFNNAEYDSLMQKSYNEK 473
           +    ++ G F+V RAGW  DY +A +FL L +SSN T N  ++++AEYD++++K+    
Sbjct: 426 YLDTRRQ-GNFDVTRAGWCGDYNEASSFLTLMLSSN-TSNDPQYHSAEYDAVIEKAKTST 483

Query: 474 DPAARSKLLHEAETILMKEQPVAPLLTQADLWLVSNRVKGWVDNAANEHL 523
               R KL  +AE +L ++ P+AP+       LVS  V G+  N A + +
Sbjct: 484 SEEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKI 533