Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  189 bits (479), Expect = 9e-53
 Identities = 108/308 (35%), Positives = 179/308 (58%), Gaps = 6/308 (1%)

Query: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPFNLERPLPP--QTMENLMRTYHLDEP 58
           M+ +I RR   +V ++  ++T+ FFL R   G P  L  PL    +  +   R   LD+P
Sbjct: 1   MLGYIGRRAYHSVISVIGLLTLVFFLTRLT-GDPSALYLPLDSSLEARQAFARLNGLDQP 59

Query: 59  LWRQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLAGTL 118
           ++ Q+  YL+N ++ DFG S + ++ +  ++  +  P +L+L   A+ LA V  ++ G L
Sbjct: 60  IYVQFFQYLQNLMSLDFGQS-LRQNRSAIEVALEAFPATLKLALVAMSLATVLAIVVGAL 118

Query: 119 AALRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGSWGDGSLRYLILPM 178
           AA R  S FD     +S  G + P+F +A V  LVFAV LG+LP    G G+  + I+P+
Sbjct: 119 AAARPGSLFDRIAGLVSLAGASTPDFWIAIVGILVFAVGLGILPTS--GTGTALHWIMPI 176

Query: 179 IALALPQLAVIARLTRGAMIEALRMDHIRTAKAYGLPARSVVVLHAMRAAMLPVVSYLAP 238
           + L L    ++ ++ RG MI AL    I+TA A G+  R ++  HA+R ++LPV++    
Sbjct: 177 VVLMLRPFGLLVQVVRGTMISALASPFIKTAHAKGMKRRKIIFGHALRNSLLPVITVAGD 236

Query: 239 CAAALLTGSAVIETIFTIPGVGRYFVLGAINRDYTLVMGTVVLVAIFVIVFNLLVDILYG 298
            A  L+ G+ V+ETIF  PG+G+  +   I RD+ +V  T+++ AI + + N+ +D+LY 
Sbjct: 237 LATGLINGAVVVETIFGWPGIGKLMIDSIIQRDFAVVQSTILVTAIAIFIVNIAIDLLYA 296

Query: 299 LLDPRVRH 306
           +LDPR+R+
Sbjct: 297 VLDPRIRY 304