Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  171 bits (432), Expect = 3e-47
 Identities = 100/312 (32%), Positives = 169/312 (54%), Gaps = 6/312 (1%)

Query: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPF-----NLERPLPPQTMENLMRTYHL 55
           M+ F LRR+   +PT+ +V  + F +    PG        +  R   PQ +  L   + L
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 56  DEPLWRQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLA 115
           ++PL  +++ Y+ +    D G S+  +   V  LI   +  SL+L   A++ ALV  V  
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQ-PVIDLINDRMWASLQLAIAAMIFALVISVPL 119

Query: 116 GTLAALRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGSWGDGSLRYLI 175
           G +AALR  S  D   M  +  G+++P F +  ++  +FA+ L  LP+  +GDGS R LI
Sbjct: 120 GFVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGDGSFRNLI 179

Query: 176 LPMIALALPQLAVIARLTRGAMIEALRMDHIRTAKAYGLPARSVVVLHAMRAAMLPVVSY 235
           LP + L +  LA++AR TR  +++ L  D IRTA + G+    VV  H  R A++ +V+ 
Sbjct: 180 LPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIVTT 239

Query: 236 LAPCAAALLTGSAVIETIFTIPGVGRYFVLGAINRDYTLVMGTVVLVAIFVIVFNLLVDI 295
           +     +L+  + VIE +F  PG+G   V    +RD  +V GT++++ ++ +V N  VD+
Sbjct: 240 VGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAVDL 299

Query: 296 LYGLLDPRVRHD 307
           +Y  +DPR++ +
Sbjct: 300 IYAAIDPRIKQE 311