Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 325 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  182 bits (461), Expect = 1e-50
 Identities = 111/321 (34%), Positives = 171/321 (53%), Gaps = 17/321 (5%)

Query: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPFNLER--PLPPQTMENLMRTYHLDEP 58
           MIS  L RL  A   L  +  I F  +       FN+       P+ +        LD+P
Sbjct: 3   MISVALGRLGQAFLLLIAMSLIGFIGIHSVGNPVFNVVNIETATPEDIHAATIALGLDQP 62

Query: 59  LWRQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLAGTL 118
           +WRQYL ++ N V+G+FG SYIY      +L+   LP +LEL S A+L+A   G   G L
Sbjct: 63  IWRQYLAFIGNVVSGNFGTSYIYH-LPAFELVMSKLPATLELASIAMLIAAPLGTGLGLL 121

Query: 119 AALRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGSWG----------- 167
           A  R  + FD +++  S   +++P+F +A +L LV A++ G  P+G  G           
Sbjct: 122 AGRRSGTLFDRTMVKASVSALSIPSFWLAMMLILVGAILTGWFPSGGRGLTASFLGQEWS 181

Query: 168 ---DGSLRYLILPMIALALPQLAVIARLTRGAMIEALRMDHIRTAKAYGLPARSVVVLHA 224
                 L +L+LP +ALA+P +A+IARL+R   IE   +D+ R  +A GL AR ++  H 
Sbjct: 182 FLTANGLWHLVLPALALAIPNIALIARLSRSGTIEVENLDYTRFCRAKGLSARRILFRHT 241

Query: 225 MRAAMLPVVSYLAPCAAALLTGSAVIETIFTIPGVGRYFVLGAINRDYTLVMGTVVLVAI 284
           +    +P+V+ +      +L  + V+ETIF+ PGVG+  +      D  +VM T+ ++A+
Sbjct: 242 LPNISVPIVTIIGLQFGGMLAFAVVVETIFSWPGVGKLLIDSIQLLDRPVVMATLTVIAV 301

Query: 285 FVIVFNLLVDILYGLLDPRVR 305
             +  N LVD+ Y +LDPRVR
Sbjct: 302 AFVALNALVDLFYAVLDPRVR 322