Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 315 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  198 bits (503), Expect = 2e-55
 Identities = 121/315 (38%), Positives = 181/315 (57%), Gaps = 11/315 (3%)

Query: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPFN--LERPLPPQTMENLMRTYHLDEP 58
           M +++L+RL + VP LF +  I F +M   PG      L     P+ +E + R   LD+P
Sbjct: 1   MQAYVLKRLVAVVPVLFGLSIIVFLVMGLIPGDTATAILGSYATPENVERINRDLGLDKP 60

Query: 59  LWRQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLAGTL 118
           L +QY I++ N + GDFG S+      + +++ +    +L L   +L+L  V G+LAG +
Sbjct: 61  LVQQYAIWIGNVLQGDFGRSFALNRPVLDEVLER-FQATLVLAGVSLVLCSVIGLLAGVV 119

Query: 119 AALRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGS----WGDGSLR-- 172
           +A+RQ    D  +      GI+ P+F +  +L  +FAV   +LPA      +G G L+  
Sbjct: 120 SAVRQFGWADRVITFFVLAGISTPSFWLGLLLIYLFAVHWRILPASGMYAVYGRGDLKDL 179

Query: 173 --YLILPMIALALPQLAVIARLTRGAMIEALRMDHIRTAKAYGLPARSVVVLHAMRAAML 230
             +LILP   LA+    VIARLTRGAM+E LR D++RTA+A GLP R V+  HA RAA++
Sbjct: 180 LLHLILPAATLAVVAAGVIARLTRGAMLEVLRQDYVRTARAKGLPERRVIYAHAFRAALV 239

Query: 231 PVVSYLAPCAAALLTGSAVIETIFTIPGVGRYFVLGAINRDYTLVMGTVVLVAIFVIVFN 290
            VV  +   A  +L G+  +ET+F  PG+G   V     RD  LV G V++VA   ++FN
Sbjct: 240 SVVPAIGIQAGFVLGGAVYVETVFQWPGIGAMLVKAISTRDILLVQGGVLVVAASYVLFN 299

Query: 291 LLVDILYGLLDPRVR 305
           LL D++  +LDPR+R
Sbjct: 300 LLADVVQSMLDPRIR 314